Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1143 127 2e-24 >seq1143 Length=393487 Score = 127 bits (140), Expect = 2e-24 Identities = 319/478 (67%), Gaps = 9/478 (2%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || | |||||||||| ||| || || | || ||| | || |||| Sbjct 18705 CAGCCCAACTCTGGTGCTCAGGGTGAGTTTGCTGGTCT--TCGCTGCATCAAGGCCTACC 18648 Query 159362 ATCAAGGATC-AGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || | | || || |||| || || |||| || | || || || || Sbjct 18647 A-CGAGGCTCGATCTGGCGAGAAGCGAAAGGTCTGCCTGATCCCCGTTTCTGCCCACGGC 18589 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || |||| ||||| || ||||| || || |||||||||||| | Sbjct 18588 ACCAACCCTGCCTCTGCAGCTATGGCTGGTATGAAGGTCGTCACTGTCAAGTGTGACGGC 18529 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537 | || ||| ||| | ||||| | ||||| || || ||| | | | ||| Sbjct 18528 AAGACTGGTAACCTGGACATTGAGGATCTCAAGGCCAAGTGTGTCAAGCACGCTGATGAG 18469 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || | ||| ||| | || || || || || |||||| ||||| | | |||| Sbjct 18468 CTTGCTGCTATCATGGTCACCTACCCTTCCACCTTTGGTGTCTTTGAGCCCGAGATCAAG 18409 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 ||| | || | ||||||| ||| | ||||||| || || | ||||| || || | Sbjct 18408 CAGGTTTGCGATCTTGTTCACGAGCACGGTGGTCTCGTCTACATGGATGGCGCCAACATG 18349 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || ||| | ||||| || ||||| ||||| ||||| || ||||| ||| Sbjct 18348 AACGCCCAGATTGGTCTCTGCTCTCCTGGTGACATCGGTGCTGATGTCTGCCATCTTAAC 18289 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 | || ||||| ||||||||||| || || ||||| || ||||| || |||||||||| Sbjct 18288 CTTCACAAGACCTTCTGTATTCCTCACGGTGGTGGTGGCCCTGGTGTCGGTCCTATTG 18231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588039541884960