Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq810 95.1 1e-14
>seq810
Length=454684
Score = 95.1 bits (104), Expect = 1e-14
Identities = 198/293 (68%), Gaps = 13/293 (4%)
Strand=Plus/Plus
Query 29685 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCAC 29744
||| ||||| || |||| | | ||||||||||||||| | |||| | | | ||| |
Sbjct 151252 ATGGGGGTCATATCCCTTGACTGTGAAATCCTCTGCCTTCCATCCGTCAATGCT-TCCGC 151310
Query 29745 CCTCCTGTTTATCCT-CAGTGT-------GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 29796
||| ||| || || | | ||| ||| || ||||| | ||| || |||
Sbjct 151311 CCT----TTTCTCGGGCAATTTCCAACTCGGGGAAGTTTCGCGGCTCGCGCTCAAGTTGA 151366
Query 29797 GTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAAC 29856
||| || | || |||||||| ||||| || ||||| || |||| | ||| ||
Sbjct 151367 ACCTTGAGAGCGTCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGGGTAAGG 151426
Query 29857 TCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCG 29916
|| || | ||| | ||| || |||| ||||| || || || | |||||||||
Sbjct 151427 CTGCCAGGGACCAGCTCACAGACATGCGCCAACATGTGTGTTAGCAGCGCGTAGCTGGCA 151486
Query 29917 ATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969
||||| ||||| || ||||| ||||| || | || | ||||||||||||||
Sbjct 151487 ATGTTGAAGGGAACACCGAGACCCATATCGCAGGATCGTTGGTAGAGCTGACA 151539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408609701677178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |