Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq839 295 1e-74 seq700 205 2e-47 >seq839 Length=23613 Score = 295 bits (326), Expect = 1e-74 Identities = 1142/1758 (65%), Gaps = 86/1758 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || |||||||||||| || || || ||||||||||||||||| Sbjct 14272 ACAGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTG 14213 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| |||||| | |||||| |||| ||| |||| | | || Sbjct 14212 AGACCAAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCCATTGTAG- 14161 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | || || || | ||| || |||||| ||| || || || | | Sbjct 14160 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGATCAATAAAGGCACC 14112 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || ||||| | | | | || ||| || | ||||||||| |||||| | | Sbjct 14111 ACGGTCGGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAG 14052 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845 | |||| || | |||| | |||||||||||| | ||| || | | ||| | Sbjct 14051 AGCCTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTCTCAGCAATGAT 13992 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | ||| | ||| ||| || ||| || | || ||||| || Sbjct 13991 ACGGTTCTT---CATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCA 13935 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| || || | || || | | ||||| | ||| || || || Sbjct 13934 GGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTATA 13875 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||||| || ||||||||| || |||||||| | || ||||| || ||||| ||||| Sbjct 13874 GGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTAGGCATAGGAGC 13815 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTG---CTCGCCGATGAGGCGC-CGAAGCTCTGCCC 213081 || || |||||||| | | ||||| || | | | | | || || | ||| Sbjct 13814 AACGAGCAGACTGTTGCGGATACCGTGAGTCTTGAC----ATCCTCTCGGAGGGATTCCC 13759 Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141 | ||||| | |||| ||| ||| || ||||||||||||||||| | || | Sbjct 13758 ACTCCCAAAGGTCAGA-AGG--------CTTGACATTCCACATGTCAAACTGGAGAATAC 13708 Query 213142 CTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197 | |||| | || ||||| | | | ||||||||| || | ||||||||| ||| Sbjct 13707 C----CTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGC 13652 Query 213198 TCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTC 213257 | || | |||||||||| ||||||||| || || || | | |||| |||| Sbjct 13651 TGTACAGAAGTGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCA 13592 Query 213258 TTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGG 213317 ||||| || ||| |||||||| | |||| ||||||| || || || Sbjct 13591 CGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGA 13532 Query 213318 ACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTA 213376 || || | || ||||||| ||| | || ||| ||| |||| ||| | | ||||| Sbjct 13531 ACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGC-CTCTTGGACAGGGTA 13473 Query 213377 AAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAG 213436 ||| |||||| |||||||| ||||||||| | |||| ||||| | | ||| Sbjct 13472 GTGGTTCACGTCGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCTCGTGCAG 13413 Query 213437 GTACTCGTGATTGAACACGTAGCCCC--CGTCCTGCACAAACTCAGGCAGGGCGATGCTG 213494 | || | | | | || ||| | ||| | | || ||||| | | | | Sbjct 13412 CTTCTTGAAGTCGTAGAC--AGCATCTTCGTAGTTGATGAAAGAGGGCAGAGACAAGGAG 13355 Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 || ||||||||||| || ||||| | || | |||||| || ||||| ||||||||| Sbjct 13354 GCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCACAGG 13295 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTT 213613 ||| || ||||||||| || ||||||| ||||| ||| ||| | |||| |||||| Sbjct 13294 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGTGATCCTT 13236 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGG 213671 |||||||||| | ||| || |||||| ||||| | | || | |||| ||| || Sbjct 13235 GTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAA--TGGCATACCAAAGC 13178 Query 213672 TACCTGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGA 213729 | | ||||||| || || ||| | | | | | |||||||| ||||| | Sbjct 13177 TTCTGAGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTACTTCTCGTACA 13123 Query 213730 GCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788 | | | ||| || | || || | | | | || || || || ||| ||||| Sbjct 13122 GAGCCTCGAACTCATCACCGTAGCAGTCAG-CAAGACCAGGGCACTCGTTGGGGCACATA 13064 Query 213789 AGGCTCCAGTC-CCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || |||| || || || |||| ||| | || |||||| || || |||| ||| || || Sbjct 13063 AGAGTCCATTCGCCATTCTTCTC-GACACGCTTCATGAAGAGATCAGGGATCCAAAGGGC 13005 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 ||||||||| | | | ||| ||| || ||| || || ||||| || || Sbjct 13004 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964 || |||| || |||||||| ||||| | |||||| || ||||| || | || | || Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTT 12885 Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024 ||| |||||||| || | || ||||||| | ||||| | ||| || | || Sbjct 12884 GCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACC 12825 Query 214025 GTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATG 214082 ||| || || ||||| || || || || ||||||| ||| | | | || | | Sbjct 12824 GTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTT 12765 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 | || || || ||||| || |||||| |||||||| || | | | || || | Sbjct 12764 CA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAG 12707 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCGAGAGCTGGGGCCT 214201 || ||| | |||||||| || | | ||| ||| |||||| || ||||| ||| Sbjct 12706 ATACCGTCGATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGAGGACAGCTGAGGCTG 12648 Query 214202 GGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAG 214261 | | |||| |||||| || |||||| ||||| | | |||||| |||| | ||| Sbjct 12647 AGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAG 12588 Query 214262 CCTGTAGGTCTCCAGGAC 214279 |||| ||||||| ||| Sbjct 12587 GTTGTATGTCTCCAAGAC 12570 >seq700 Length=246488 Score = 205 bits (226), Expect = 2e-47 Identities = 493/736 (67%), Gaps = 29/736 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| || ||||| ||||| || | | ||||||||||| Sbjct 28279 CTGGTAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTC 28220 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || |||||| | || ||| | | |||| Sbjct 28219 CATGAAGTCGAAGGGGTTGGTGGCCTTGTACACCT-TCTCGTTGCCGAGGGCGACGAGCA 28161 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||||||||| | ||||||| | ||||||||||| || | Sbjct 28160 GACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGAG 28101 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||| | ||||| ||||| |||| || ||| || ||||| || | || Sbjct 28100 CACAAGGG-AGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATG 28042 Query 48077 TGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCA 48128 | || || | |||| ||| || ||| || | ||| | | ||| | Sbjct 28041 TCCT------GGATCATCTGC----TTGCTG-GCACGTCCCTTGAGGTGAGAGTGGAGGA 27993 Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188 |||||||||||| |||| | || ||||| || ||||||| |||| ||||| | Sbjct 27992 GGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCA 27933 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248 |||| ||||||| || | || |||||||||||||| | || || | || ||||| Sbjct 27932 GACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGA 27873 Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308 |||| ||||| || || || || || || | || | || |||| ||||||||| Sbjct 27872 AGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCT 27813 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 |||||| || ||||| || |||||||| |||||| || || || || | ||| Sbjct 27812 GGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGT 27753 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGT 48425 |||||| | | | || | | | ||| | ||||| | ||||||| | || Sbjct 27752 TGAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG---AGAGT 27696 Query 48426 ACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAA 48485 | | || ||||| | ||||| || ||||||||| ||||||||| | |||||| Sbjct 27695 ATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAG 27636 Query 48486 ACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAG 48545 | ||| || || | ||||| ||| | || ||||| ||||| || ||||| || | Sbjct 27635 GGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGG 27576 Query 48546 CAGCAAAGAAGGCAAG 48561 | |||||||| ||||| Sbjct 27575 CGGCAAAGAAAGCAAG 27560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931514332362240