Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq839 295 1e-74
seq700 205 2e-47
>seq839
Length=23613
Score = 295 bits (326), Expect = 1e-74
Identities = 1142/1758 (65%), Gaps = 86/1758 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || |||||||||||| || || || |||||||||||||||||
Sbjct 14272 ACAGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTG 14213
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| | |||||| |||| ||| |||| | | ||
Sbjct 14212 AGACCAAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCCATTGTAG- 14161
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | || || || | ||| || |||||| ||| || || || | |
Sbjct 14160 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGATCAATAAAGGCACC 14112
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || ||||| | | | | || ||| || | ||||||||| |||||| | |
Sbjct 14111 ACGGTCGGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAG 14052
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845
| |||| || | |||| | |||||||||||| | ||| || | | ||| |
Sbjct 14051 AGCCTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTCTCAGCAATGAT 13992
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| | | ||| | ||| ||| || ||| || | || ||||| ||
Sbjct 13991 ACGGTTCTT---CATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCA 13935
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
|||||||| | |||||| || || | || || | | ||||| | ||| || || ||
Sbjct 13934 GGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTATA 13875
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
|||||||| || ||||||||| || |||||||| | || ||||| || ||||| |||||
Sbjct 13874 GGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTAGGCATAGGAGC 13815
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTG---CTCGCCGATGAGGCGC-CGAAGCTCTGCCC 213081
|| || |||||||| | | ||||| || | | | | | || || | |||
Sbjct 13814 AACGAGCAGACTGTTGCGGATACCGTGAGTCTTGAC----ATCCTCTCGGAGGGATTCCC 13759
Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141
| ||||| | |||| ||| ||| || ||||||||||||||||| | || |
Sbjct 13758 ACTCCCAAAGGTCAGA-AGG--------CTTGACATTCCACATGTCAAACTGGAGAATAC 13708
Query 213142 CTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197
| |||| | || ||||| | | | ||||||||| || | ||||||||| |||
Sbjct 13707 C----CTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGC 13652
Query 213198 TCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTC 213257
| || | |||||||||| ||||||||| || || || | | |||| ||||
Sbjct 13651 TGTACAGAAGTGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCA 13592
Query 213258 TTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGG 213317
||||| || ||| |||||||| | |||| ||||||| || || ||
Sbjct 13591 CGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGA 13532
Query 213318 ACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTA 213376
|| || | || ||||||| ||| | || ||| ||| |||| ||| | | |||||
Sbjct 13531 ACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGC-CTCTTGGACAGGGTA 13473
Query 213377 AAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAG 213436
||| |||||| |||||||| ||||||||| | |||| ||||| | | |||
Sbjct 13472 GTGGTTCACGTCGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCTCGTGCAG 13413
Query 213437 GTACTCGTGATTGAACACGTAGCCCC--CGTCCTGCACAAACTCAGGCAGGGCGATGCTG 213494
| || | | | | || ||| | ||| | | || ||||| | | | |
Sbjct 13412 CTTCTTGAAGTCGTAGAC--AGCATCTTCGTAGTTGATGAAAGAGGGCAGAGACAAGGAG 13355
Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554
|| ||||||||||| || ||||| | || | |||||| || ||||| |||||||||
Sbjct 13354 GCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCACAGG 13295
Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTT 213613
||| || ||||||||| || ||||||| ||||| ||| ||| | |||| ||||||
Sbjct 13294 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGTGATCCTT 13236
Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGG 213671
|||||||||| | ||| || |||||| ||||| | | || | |||| ||| ||
Sbjct 13235 GTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAA--TGGCATACCAAAGC 13178
Query 213672 TACCTGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGA 213729
| | ||||||| || || ||| | | | | | |||||||| ||||| |
Sbjct 13177 TTCTGAGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTACTTCTCGTACA 13123
Query 213730 GCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788
| | | ||| || | || || | | | | || || || || ||| |||||
Sbjct 13122 GAGCCTCGAACTCATCACCGTAGCAGTCAG-CAAGACCAGGGCACTCGTTGGGGCACATA 13064
Query 213789 AGGCTCCAGTC-CCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847
|| |||| || || || |||| ||| | || |||||| || || |||| ||| || ||
Sbjct 13063 AGAGTCCATTCGCCATTCTTCTC-GACACGCTTCATGAAGAGATCAGGGATCCAAAGGGC 13005
Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907
||||||||| | | | ||| ||| || ||| || || ||||| || ||
Sbjct 13004 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945
Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964
|| |||| || |||||||| ||||| | |||||| || ||||| || | || | ||
Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTT 12885
Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024
||| |||||||| || | || ||||||| | ||||| | ||| || | ||
Sbjct 12884 GCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACC 12825
Query 214025 GTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATG 214082
||| || || ||||| || || || || ||||||| ||| | | | || | |
Sbjct 12824 GTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTT 12765
Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142
| || || || ||||| || |||||| |||||||| || | | | || || |
Sbjct 12764 CA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAG 12707
Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCGAGAGCTGGGGCCT 214201
|| ||| | |||||||| || | | ||| ||| |||||| || ||||| |||
Sbjct 12706 ATACCGTCGATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGAGGACAGCTGAGGCTG 12648
Query 214202 GGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAG 214261
| | |||| |||||| || |||||| ||||| | | |||||| |||| | |||
Sbjct 12647 AGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAG 12588
Query 214262 CCTGTAGGTCTCCAGGAC 214279
|||| ||||||| |||
Sbjct 12587 GTTGTATGTCTCCAAGAC 12570
>seq700
Length=246488
Score = 205 bits (226), Expect = 2e-47
Identities = 493/736 (67%), Gaps = 29/736 (4%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| || ||||| ||||| || | | |||||||||||
Sbjct 28279 CTGGTAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTC 28220
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || |||||| | || ||| | | ||||
Sbjct 28219 CATGAAGTCGAAGGGGTTGGTGGCCTTGTACACCT-TCTCGTTGCCGAGGGCGACGAGCA 28161
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| |||||| |||||||||| | ||||||| | ||||||||||| || |
Sbjct 28160 GACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGAG 28101
Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| ||| | ||||| ||||| |||| || ||| || ||||| || | ||
Sbjct 28100 CACAAGGG-AGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATG 28042
Query 48077 TGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCA 48128
| || || | |||| ||| || ||| || | ||| | | ||| |
Sbjct 28041 TCCT------GGATCATCTGC----TTGCTG-GCACGTCCCTTGAGGTGAGAGTGGAGGA 27993
Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188
|||||||||||| |||| | || ||||| || ||||||| |||| ||||| |
Sbjct 27992 GGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCA 27933
Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248
|||| ||||||| || | || |||||||||||||| | || || | || |||||
Sbjct 27932 GACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGA 27873
Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308
|||| ||||| || || || || || || | || | || |||| |||||||||
Sbjct 27872 AGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCT 27813
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
|||||| || ||||| || |||||||| |||||| || || || || | |||
Sbjct 27812 GGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGT 27753
Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGT 48425
|||||| | | | || | | | ||| | ||||| | ||||||| | ||
Sbjct 27752 TGAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG---AGAGT 27696
Query 48426 ACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAA 48485
| | || ||||| | ||||| || ||||||||| ||||||||| | ||||||
Sbjct 27695 ATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAG 27636
Query 48486 ACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAG 48545
| ||| || || | ||||| ||| | || ||||| ||||| || ||||| || |
Sbjct 27635 GGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGG 27576
Query 48546 CAGCAAAGAAGGCAAG 48561
| |||||||| |||||
Sbjct 27575 CGGCAAAGAAAGCAAG 27560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931514332362240
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