Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq700 196 9e-45
seq839 187 5e-42
>seq700
Length=246488
Score = 196 bits (216), Expect = 9e-45
Identities = 386/568 (68%), Gaps = 5/568 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | || |||||| ||||| ||||| |||||
Sbjct 27434 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 27493
Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
||||||| | | | |||| || |||| | ||||||||| | || ||
Sbjct 27494 TCCAAGGATCTCCATGACTGGAACAACCGTCTAACTGCGGACGAGCAGTACTTCATCTCC 27553
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || |||||||| ||||| |||||||| || |||||||| || ||| ||
Sbjct 27554 CACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAACCTTGTTGAGCGA 27613
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | | || || ||| | ||||| || ||||||||||||||||| ||
Sbjct 27614 TTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATG 27673
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773
|| || | ||||| || || | ||| | || ||||| | || ||
Sbjct 27674 GAGAACATCCACTCCGAAACATACTCTCTGCTCATTGACACCTACATCAAGGAGCCTGCT 27733
Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833
||||| | || || ||| | || ||| || ||||| | ||||||
Sbjct 27734 CAGAGAACTTACCTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCTGAT 27793
Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893
||||| || |||||| | | ||| | || | |||| | |||| || || ||||||
Sbjct 27794 TGGGCTATTCGATGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGTCTTGTTGCCTTT 27853
Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953
|||||||| ||||| ||||| ||||||||| | ||||| |||| |||||||||||| ||
Sbjct 27854 GCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCTGGCTCAAGAAG 27913
Query 25954 AAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012
|| ||||||||| ||| ||||| || |||||||||||| | |||||||||||
Sbjct 27914 CGTGGTCTCATGCCCGGTCTG-ACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCT 27972
Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTAC 26040
|||| || ||||||||||| ||| ||
Sbjct 27973 TCACACCGACTTTGCCTGCCTCCTCCAC 28000
>seq839
Length=23613
Score = 187 bits (206), Expect = 5e-42
Identities = 713/1099 (65%), Gaps = 43/1099 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| ||||||||||||||||||||||| ||||| |||||| || ||| | ||||||||
Sbjct 13639 GTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCGGG 13581
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
||| |||||||| || || | ||| | || || || || || || || | |||
Sbjct 13580 AGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGAACACCAAGACC 13521
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
||||| | ||| | | ||||| | ||| || ||| | || || || ||| |||
Sbjct 13520 AATGGGTCGGTGACGCATGTTGCTGTTGCGA--GCCTCTTGGACAGGGTAGTGGTTCACG 13463
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
||||| | ||||| ||||| | | ||||| | |||||| |||||||| |
Sbjct 13462 TCGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAG 13403
Query 221654 TTGAACAC--CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
| | | || || || ||| || || | |||| | || | | |
Sbjct 13402 TCGTAGACAGCATCTT-----CGTAGTTGATG---------AAAGAGGGCAGAGACAAGG 13357
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771
||| ||||| || || || ||||| || | |||| || ||||| || || |
Sbjct 13356 AGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCACA 13297
Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCC 221830
||||| || |||||| || |||| || || || |||||| ||| ||| | |||
Sbjct 13296 GGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG-CAGTGATCC 13238
Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890
||||||||||| || || |||||||| ||| ||| | ||||| | ||| ||
Sbjct 13237 TTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAGC 13178
Query 221891 TCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAG 221949
| |||| || | | | | | | |||||| ||| | | | || || ||||
Sbjct 13177 T-TCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCG-TACAGAG 13120
Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009
| | | |||| |||||||| || | || || || ||| | ||| ||||| ||
Sbjct 13119 CCT--CGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAG 13062
Query 222010 ACTCCAGT-GC--TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066
| |||| | || || || || ||| | || ||||||||| || |||||||| || ||
Sbjct 13061 AGTCCATTCGCCATTCTTCTC---GACACGCTTCATGAAGAGATCAGGGATCCAAAGGGC 13005
Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126
| | || || || | | || ||||||| |||| ||| || | ||||| | ||
Sbjct 13004 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945
Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186
||| || | || |||||||| ||||| || |||| || | || || |||||||||||
Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTT 12885
Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245
||||||||| || | | | ||| | |||||| | || || | || || | |
Sbjct 12884 GCCACCCTGGTCGA-CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACAC 12826
Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG- 222302
|||| || ||| ||||| || |||||| | ||| ||| | || | | |||
Sbjct 12825 CGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCAC---GGATTCGGTGGA 12769
Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362
| || ||| |||||||| || || || |||||||| || ||||||| || ||
Sbjct 12768 CGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGT 12709
Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422
||| || || || ||||||||| | | | || || || || |||| ||||| |
Sbjct 12708 AGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCT 12649
Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482
| || || ||||| || || ||||| || || || ||| | |||||||| |
Sbjct 12648 GAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGA 12589
Query 222483 GATCGTACGTCTCTACGAC 222501
| | ||| ||||| | |||
Sbjct 12588 GGTTGTATGTCTCCAAGAC 12570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928826385651840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |