Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq700 196 9e-45 seq839 187 5e-42 >seq700 Length=246488 Score = 196 bits (216), Expect = 9e-45 Identities = 386/568 (68%), Gaps = 5/568 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| ||||| ||||| ||||| Sbjct 27434 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 27493 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | | | |||| || |||| | ||||||||| | || || Sbjct 27494 TCCAAGGATCTCCATGACTGGAACAACCGTCTAACTGCGGACGAGCAGTACTTCATCTCC 27553 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || |||||||| ||||| |||||||| || |||||||| || ||| || Sbjct 27554 CACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAACCTTGTTGAGCGA 27613 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || ||||||||||||||||| || Sbjct 27614 TTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATG 27673 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||| || || | ||| | || ||||| | || || Sbjct 27674 GAGAACATCCACTCCGAAACATACTCTCTGCTCATTGACACCTACATCAAGGAGCCTGCT 27733 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 ||||| | || || ||| | || ||| || ||||| | |||||| Sbjct 27734 CAGAGAACTTACCTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCTGAT 27793 Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| || |||||| | | ||| | || | |||| | |||| || || |||||| Sbjct 27794 TGGGCTATTCGATGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGTCTTGTTGCCTTT 27853 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 |||||||| ||||| ||||| ||||||||| | ||||| |||| |||||||||||| || Sbjct 27854 GCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCTGGCTCAAGAAG 27913 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 || ||||||||| ||| ||||| || |||||||||||| | ||||||||||| Sbjct 27914 CGTGGTCTCATGCCCGGTCTG-ACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCT 27972 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||| || ||||||||||| ||| || Sbjct 27973 TCACACCGACTTTGCCTGCCTCCTCCAC 28000 >seq839 Length=23613 Score = 187 bits (206), Expect = 5e-42 Identities = 713/1099 (65%), Gaps = 43/1099 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||||||||||||||| ||||| |||||| || ||| | |||||||| Sbjct 13639 GTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCGGG 13581 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| |||||||| || || | ||| | || || || || || || || | ||| Sbjct 13580 AGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGAACACCAAGACC 13521 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | ||||| | ||| || ||| | || || || ||| ||| Sbjct 13520 AATGGGTCGGTGACGCATGTTGCTGTTGCGA--GCCTCTTGGACAGGGTAGTGGTTCACG 13463 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| ||||| | | ||||| | |||||| |||||||| | Sbjct 13462 TCGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAG 13403 Query 221654 TTGAACAC--CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 | | | || || || ||| || || | |||| | || | | | Sbjct 13402 TCGTAGACAGCATCTT-----CGTAGTTGATG---------AAAGAGGGCAGAGACAAGG 13357 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 ||| ||||| || || || ||||| || | |||| || ||||| || || | Sbjct 13356 AGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCACA 13297 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCC 221830 ||||| || |||||| || |||| || || || |||||| ||| ||| | ||| Sbjct 13296 GGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG-CAGTGATCC 13238 Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890 ||||||||||| || || |||||||| ||| ||| | ||||| | ||| || Sbjct 13237 TTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAGC 13178 Query 221891 TCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAG 221949 | |||| || | | | | | | |||||| ||| | | | || || |||| Sbjct 13177 T-TCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCG-TACAGAG 13120 Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009 | | | |||| |||||||| || | || || || ||| | ||| ||||| || Sbjct 13119 CCT--CGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAG 13062 Query 222010 ACTCCAGT-GC--TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 | |||| | || || || || ||| | || ||||||||| || |||||||| || || Sbjct 13061 AGTCCATTCGCCATTCTTCTC---GACACGCTTCATGAAGAGATCAGGGATCCAAAGGGC 13005 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | | || || || | | || ||||||| |||| ||| || | ||||| | || Sbjct 13004 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 ||| || | || |||||||| ||||| || |||| || | || || ||||||||||| Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTT 12885 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 ||||||||| || | | | ||| | |||||| | || || | || || | | Sbjct 12884 GCCACCCTGGTCGA-CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACAC 12826 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG- 222302 |||| || ||| ||||| || |||||| | ||| ||| | || | | ||| Sbjct 12825 CGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCAC---GGATTCGGTGGA 12769 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | || ||| |||||||| || || || |||||||| || ||||||| || || Sbjct 12768 CGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGT 12709 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||| || || || ||||||||| | | | || || || || |||| ||||| | Sbjct 12708 AGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCT 12649 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | || || ||||| || || ||||| || || || ||| | |||||||| | Sbjct 12648 GAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGA 12589 Query 222483 GATCGTACGTCTCTACGAC 222501 | | ||| ||||| | ||| Sbjct 12588 GGTTGTATGTCTCCAAGAC 12570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928826385651840