Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq391 100 2e-15 >seq391 Length=65998 Score = 100 bits (110), Expect = 2e-15 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| ||||| || |||||||| || ||| || || || || |||| || || Sbjct 44680 CGAAGGCGGAGGACGAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGACAGGGTG 44739 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | || ||||| ||||| || || ||||| | || || || ||||||||||| || Sbjct 44740 CGCCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCC 44799 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 |||||||| |||||||| |||||| || || ||||||| | | | ||||| Sbjct 44800 TCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGA-CCTCAAG 44858 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || |||||||| ||||| || || ||||| Sbjct 44859 GGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTG 44897 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || ||||| || || ||||| | || || || ||||||||||| || ||||| Sbjct 44517 ATCTTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTT 44576 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| |||||||| |||||| || || ||||||| | | | |||||||| | Sbjct 44577 GTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGA-CCTCAAGGGTGA 44635 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || |||||||| ||||| ||||| ||||| Sbjct 44636 TGGTCTTGCCGGTGAGGGTCTTGACGAATATTTG 44669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268111168764728