Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq391 100 2e-15
>seq391
Length=65998
Score = 100 bits (110), Expect = 2e-15
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
||||| ||||| || |||||||| || ||| || || || || |||| || ||
Sbjct 44680 CGAAGGCGGAGGACGAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGACAGGGTG 44739
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| || ||||| ||||| || || ||||| | || || || ||||||||||| ||
Sbjct 44740 CGCCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCC 44799
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730
|||||||| |||||||| |||||| || || ||||||| | | | |||||
Sbjct 44800 TCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGA-CCTCAAG 44858
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || |||||||| ||||| || || |||||
Sbjct 44859 GGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTG 44897
Score = 95.1 bits (104), Expect = 8e-14
Identities = 115/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| || ||||| || || ||||| | || || || ||||||||||| || |||||
Sbjct 44517 ATCTTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTT 44576
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735
||| |||||||| |||||| || || ||||||| | | | |||||||| |
Sbjct 44577 GTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGA-CCTCAAGGGTGA 44635
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || |||||||| ||||| ||||| |||||
Sbjct 44636 TGGTCTTGCCGGTGAGGGTCTTGACGAATATTTG 44669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268111168764728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |