Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1143 113 5e-20 >seq1143 Length=393487 Score = 113 bits (124), Expect = 5e-20 Identities = 262/393 (67%), Gaps = 3/393 (1%) Strand=Plus/Plus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 |||||||||| || ||||| || ||||| || || ||||||||||| ||||| || | | Sbjct 18231 CAATAGGACCGACACCAGGGCCACCACCACCGTGAGGAATACAGAAGGTCTTGTGAAGGT 18290 Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306 | ||||| || ||||| ||||| ||||| || ||||| | ||| || || | Sbjct 18291 TAAGATGGCAGACATCAGCACCGATGTCACCAGGAGAGCAGAGACCAATCTGGGCGTTCA 18350 Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366 || || ||||| | || || ||||||| | || ||||| | | || | ||| Sbjct 18351 TGTTGGCGCCATCCATGTAGACGAGACCACCGTGCTCGTGAACAAGATCGCAAACCTGCT 18410 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426 |||| | | ||||| |||||| || || || || || | ||| ||| | || | Sbjct 18411 TGATCTCGGGCTCAAAGACACCAAAGGTGGAAGGGTAGGTGACCATGATAGCAGCAAGCT 18470 Query 138427 CAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TCAT-- 138483 || | | | ||| || || ||||| | ||||| | ||| ||| || | Sbjct 18471 CATCAGCGTGCTTGACACACTTGGCCTTGAGATCCTCAATGTCCAGGTTACCAGTCTTGC 18530 Query 138484 CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTC 138543 | |||||||||||| || || ||||| || ||||| ||||| ||||| || || | Sbjct 18531 CGTCACACTTGACAGTGACGACCTTCATACCAGCCATAGCTGCAGAGGCAGGGTTGGTGC 18590 Query 138544 CATGTGCTGACTCTGGTATCAGACATACATTTC 138576 | || || || | || ||||| || || |||| Sbjct 18591 CGTGGGCAGAAACGGGGATCAGGCAGACCTTTC 18623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578986921356720