Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1143 113 5e-20
>seq1143
Length=393487
Score = 113 bits (124), Expect = 5e-20
Identities = 262/393 (67%), Gaps = 3/393 (1%)
Strand=Plus/Plus
Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246
|||||||||| || ||||| || ||||| || || ||||||||||| ||||| || | |
Sbjct 18231 CAATAGGACCGACACCAGGGCCACCACCACCGTGAGGAATACAGAAGGTCTTGTGAAGGT 18290
Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306
| ||||| || ||||| ||||| ||||| || ||||| | ||| || || |
Sbjct 18291 TAAGATGGCAGACATCAGCACCGATGTCACCAGGAGAGCAGAGACCAATCTGGGCGTTCA 18350
Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366
|| || ||||| | || || ||||||| | || ||||| | | || | |||
Sbjct 18351 TGTTGGCGCCATCCATGTAGACGAGACCACCGTGCTCGTGAACAAGATCGCAAACCTGCT 18410
Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426
|||| | | ||||| |||||| || || || || || | ||| ||| | || |
Sbjct 18411 TGATCTCGGGCTCAAAGACACCAAAGGTGGAAGGGTAGGTGACCATGATAGCAGCAAGCT 18470
Query 138427 CAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TCAT-- 138483
|| | | | ||| || || ||||| | ||||| | ||| ||| || |
Sbjct 18471 CATCAGCGTGCTTGACACACTTGGCCTTGAGATCCTCAATGTCCAGGTTACCAGTCTTGC 18530
Query 138484 CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTC 138543
| |||||||||||| || || ||||| || ||||| ||||| ||||| || || |
Sbjct 18531 CGTCACACTTGACAGTGACGACCTTCATACCAGCCATAGCTGCAGAGGCAGGGTTGGTGC 18590
Query 138544 CATGTGCTGACTCTGGTATCAGACATACATTTC 138576
| || || || | || ||||| || || ||||
Sbjct 18591 CGTGGGCAGAAACGGGGATCAGGCAGACCTTTC 18623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578986921356720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |