Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq839 230 3e-55
seq700 113 5e-20
>seq839
Length=23613
Score = 230 bits (254), Expect = 3e-55
Identities = 561/836 (67%), Gaps = 17/836 (2%)
Strand=Plus/Plus
Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278
||||| ||||||| || || | || ||| || || || || || |||||||||||
Sbjct 12520 ACATGATCATGCGTGTTGCTGTTGGTATCTGGGGTGATGATATCGAACGTGTCTTGGAGA 12579
Query 75279 CATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGC 75336
||||| || ||||| |||| | | ||| ||| || | || || || ||||| ||
Sbjct 12580 CATACAACCTCATGTCTAGCAAGTTCT--TCACTCATGCTTCCCCCACACTATTCAACGC 12637
Query 75337 TGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 75396
|||||| || || ||| ||||| ||||||||| | | | ||||||||| ||
Sbjct 12638 TGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTGATATGAAGGAGGACAGCAT 12697
Query 75397 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 75456
| |||||||||| | || || | | ||||| || || ||| |||||| |||||
Sbjct 12698 CGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTAT 12757
Query 75457 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCA 75516
||| || || |||| | | |||| ||| ||| ||||| ||||||
Sbjct 12758 TGGCTTGAACGTCCACCGAATCCGTGCCACCGGCTCTTACATTGCCGGGACCAATGGTAC 12817
Query 75517 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCA 75576
|| | ||| | |||| ||||| || || || ||| ||| || || || || | ||
Sbjct 12818 TTCTAACGGTGTCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTCGACCA 12877
Query 75577 AGCGGGGCGTC--GCAAGG-GGT-CCATCGCGGTCTACTTGGAACCATGGCATGCCGATA 75632
| | ||| | || | ||| || |||| ||||| | || || ||||| ||||||
Sbjct 12878 GG-GTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTCGAGCCCTGGCACGCCGATG 12936
Query 75633 TCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATC 75692
|| | ||||||||||| | ||| ||||| ||| | || |||| || | | || |
Sbjct 12937 TCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGACC 12996
Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752
| || |||| ||||| || || || ||||||||||| || ||| || ||| |||
Sbjct 12997 TGTTCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAATGGCGAAT 13056
Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812
|| ||||| | || || || || || ||||| | ||| ||||| ||||| |
Sbjct 13057 GGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATGAGTTCG 13116
Query 75813 AAGCCCTCTACACAAAGTATGAAGAG-GAGGGTA-GAGCCAATGCGACTGTACCA-GCCG 75869
| || || ||| ||||| || ||| ||||||| | | | || | | || || | |
Sbjct 13117 AGGCTCTGTACGAGAAGTACGA-GAGAGAGGGTAAGGGTC---GCAAGTCTATCAAGGCT 13172
Query 75870 CCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTT 75928
| || | ||||| | || |||||| | | ||||| |||||||||| || | |||||
Sbjct 13173 CAGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGGAAACCCTTTCATGCTC 13232
Query 75929 TACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCA 75988
||||||||| || ||| ||||| ||||||||||| | || || ||| |||||
Sbjct 13233 TACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAGCTCC 13292
Query 75989 AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044
|| || ||||| || ||| | |||||| | | |||||| |||||||||||
Sbjct 13293 AACCTGTGCACTGAGATTATTGAGTACTGCGCTCCTGATGAGGTCGCTGTTTGCAA 13348
>seq700
Length=246488
Score = 113 bits (124), Expect = 5e-20
Identities = 334/507 (66%), Gaps = 26/507 (5%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079
|||||||| | ||||| || |||| | |||| || ||| ||||| ||| ||
Sbjct 27782 AAGAAGGCTGATTGGGCTATTCGATGGATCCAGGACAAGAACTCT---TCCTTTGCCCAG 27838
Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTAT 65138
|| ||| |||| ||||| ||| ||||||||||||||| ||| | || ||| | ||
Sbjct 27839 CGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTT-TGCTTCCAT 27897
Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198
|| ||| | |||||||| ||||||||||| || || ||||| || || || || ||
Sbjct 27898 TTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTC 27957
Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAG 65258
|| || |||||||| ||| || |||||| || ||| || | || | || |
Sbjct 27958 TCGTGACGAGGGTCTTCACACCGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGG 28014
Query 65259 AC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGG 65315
|| ||| | | | ||||| | |||| | | || || ||| |||||| |
Sbjct 28015 ACGTGCCAGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGAA 28074
Query 65316 GTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGA 65375
|||| || || || ||||| ||| ||| | || |||||||| | ||| |
Sbjct 28075 GTTCCTCACTGAGGCTCTCCCTTGTGCTCTGCTAGGCATGAACTCGAACCTCATGAAGCA 28134
Query 65376 GTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACCCA-----T 65429
|||||| |||| || | |||||||| ||| || | | | || | | |
Sbjct 28135 GTACATCGAGTTCGTCGCTGATCGTCTGCTC------GTCGCCCTCGGCAACGAGAAGGT 28188
Query 65430 TTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAA 65489
| || || | || || || ||||| ||||| ||||| |||| ||| ||||||||
Sbjct 28189 GTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAA 28248
Query 65490 CTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||| || |||||||| |||| |||||
Sbjct 28249 CTTTTTCGAGAAGCGTGTTGCTGACTA 28275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596557773007680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |