Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq700 170 6e-37
seq2 163 8e-35
seq788 138 3e-27
seq839 136 1e-26
seq749 84.2 6e-11
>seq700
Length=246488
Score = 170 bits (188), Expect = 6e-37
Identities = 246/342 (72%), Gaps = 4/342 (1%)
Strand=Plus/Plus
Query 133318 CTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAAT 133377
||| || || | ||||| |||||| || ||||| || ||||| ||| || ||
Sbjct 27649 CTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCTCTGCTCAT 27708
Query 133378 TGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGCCATTAGCGAAT 133436
||| || |||||||| || | | |||| | || || | ||||||||| || |
Sbjct 27709 TGACACCTACATCAAGGAGCCTGCTCAGA-GAACTTACCTCTTCAACGCCGTTGACACCA 27767
Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496
||||||| || |||||| |||| ||||||||| |||||||||||||||| |
Sbjct 27768 TTCCTTGCATCCGAAAGAAGGCTGATTGGGCTATTCGATGGATCCAGGACAAGAACTCTT 27827
Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556
||||| ||||| ||||| ||||||| || ||||| || || ||||| ||||| |
Sbjct 27828 CCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCT 27887
Query 133557 TCTGCT-CTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615
| |||| | ||||| ||||| || ||||||||| | | || || ||| ||| ||||||
Sbjct 27888 T-TGCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAAC 27946
Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
|| || || || | ||||||| ||||||||||| ||||||
Sbjct 27947 GAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCC 27988
>seq2
Length=329948
Score = 163 bits (180), Expect = 8e-35
Identities = 214/294 (73%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||| | | ||||| || || |||||||||||||||||| || || || || ||
Sbjct 323966 TCTTCAAGAGCCTTGACCAATCGTCGCTGAATATAACCAGTTTCAGCAGTCTTGACTGCA 323907
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-G 302690
|||||||| ||||| | |||||| |||| || |||||||| | ||| | || ||| |
Sbjct 323906 GTATCAATCAGACCTTCTCGACCAGCCATGGCGTGGAAGAAAAACTCG-CTGGGGGTAAG 323848
Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750
|| | || | ||| |||| ||||||||||| || ||||| || | || ||||||
Sbjct 323847 GCCACGAAGGTAAGAGTTCTCGACGAAACCACGAGCTTCGGGAGAGTAATCATCCTTGGT 323788
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
|| || |||||||| | || || | ||| | || ||||||||||| || ||| ||||
Sbjct 323787 GAAATGAGGCAGGGTACGGTACTTGAAACCGAAAGGAATACGCTTTCCTTCGACGATCTG 323728
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
||| || | | || | ||||||| |||||||| | | | ||||||||| ||
Sbjct 323727 CTGACCGACGAGCGCAGTCATCTGTGAAATATTGATAGAAGAGCCCTTGGAACC 323674
Score = 84.2 bits (92), Expect = 6e-11
Identities = 103/140 (74%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || ||||| | || ||||| |||||| | |||||||||
Sbjct 324743 AGAATTTCCTTGAGACGAGGCACACCGAGAGTGACGTT---CTTGGAAGACACACCAGCA 324687
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| |||||||| ||||| || | ||||| | ||||||||||| || || || |
Sbjct 324686 AAATGGAAAGTGTTCAGTGTCATCTGAGTGGCGGGCTCACCAATGGACTGGGCAGCCAAA 324627
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 324626 ACACCAACCATTTCACCAGG 324607
>seq788
Length=215759
Score = 138 bits (152), Expect = 3e-27
Identities = 373/563 (66%), Gaps = 12/563 (2%)
Strand=Plus/Minus
Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490
||||| | | | ||||| || | ||| | || || |||| |||| || ||||||
Sbjct 94287 TGGACTCGGAAGGCATCTGACACCTCAAACAGACGCTCCTTCAAGAAGGCAGCGGCACCG 94228
Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550
|| | ||||||||||||||| ||||| || |||||||| ||||||||||| ||||| | |
Sbjct 94227 TGAGCAATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCATCTCGAGCACGA 94168
Query 251551 CCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTA 251610
|||||| |||| || || || | | | | ||||| || ||| || |||
Sbjct 94167 CCCTCGACAGGTTGCCGGGTCATAATCTGGACGGGACCACGGGCACGGGCGTGAATCTTG 94108
Query 251611 TCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTCGA--AG 251668
|| | ||||| || |||||||||||| | | || |||| ||||| || || |
Sbjct 94107 TCGTCCACCATGTGACGAAGACGCTGGTAGTACGTAGGTCCGAAGAAGA--CTTGAGCAC 94050
Query 251669 GCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCATAACCAA 251728
| | | |||||| || | |||||||| || ||| || ||||| |||||
Sbjct 94049 GGAGCTTACGTCCAGTGTGACCATTATACATGACCTCGAAACCTCGAGATTGGTAACCGT 93990
Query 251729 G-TTTCT--GTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGTGCCGT 251785
| ||||| | || ||||| | | | | ||| | | || || |||
Sbjct 93989 GCTTTCTCAGGAGTTCTGACACGGAGT---CGACGGTGACATCAGTGAATGGCGTTGCGT 93933
Query 251786 CTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGA 251845
| || | | |||| | | | || || | ||||| ||| ||| ||||| |
Sbjct 93932 CACCCTCCATACCCTCCAGTGTTGAGACCTTACTCAAAAGACACTCAATCAAATGGGCAA 93873
Query 251846 TAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCAG 251905
| ||||||||| ||||| || || || |||||||| ||||| ||| ||| || ||
Sbjct 93872 TTGTCATACGAGACGGAATGGCGTGAGGGTTGATGATAATGTCAGGTGTCAAACCTTCTC 93813
Query 251906 CAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCGTGA 251964
|||| |||||||||| || || |||| | || || || |||||||| ||||||
Sbjct 93812 TGCTGAAAGGCATATCCTCTT-GTCGATAAGTAACACCGATTGTACCCTTTTGACCGTGA 93754
Query 251965 CGAGAACTGAACTTATCACCAAT 251987
|||||| ||||| ||||||||
Sbjct 93753 CGAGAAGCAAACTTGTCACCAAT 93731
>seq839
Length=23613
Score = 136 bits (150), Expect = 1e-26
Identities = 486/755 (64%), Gaps = 15/755 (2%)
Strand=Plus/Minus
Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685
||| ||| || | ||||||| ||||||||| || || |||||| || | ||||| |
Sbjct 13323 CGCAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTT 13264
Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745
|||| || | ||| || ||||||||| || ||| | ||| |||| ||||| |||
Sbjct 13263 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCT 13204
Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805
| || || ||||| ||| || | | || || || |||| | || |
Sbjct 13203 GGGCCTCGAGAATGGCATACCAAAGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCT 13144
Query 155806 CCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
| ||| || ||| ||||| | | | || |||||||| || ||| || ||||
Sbjct 13143 CTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCATCACCGTAGCAGTCAGCAAGACCAG 13084
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATT-----TTATTACCGATTACACGCTCCAT 155920
|||||| | |||||| | || | ||| || || || ||| |||||| |||
Sbjct 13083 GGCACTCGTTGGGGCACATAAGAGTCCA--TTCGCCATTCTTCTCGA---CACGCTTCAT 13029
Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980
|| | |||| ||||| || ||| ||||| | || |||||| | ||
Sbjct 13028 GAAGAGATCAGGGATCCAAAGGGCCAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACC 12969
Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040
||| ||||| || || || | ||| || | ||| | || ||||| || || ||
Sbjct 12968 GTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGAT 12909
Query 156041 AGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097
||| || |||| | |||| |||||||| || || || |||||||| || |||||
Sbjct 12908 AGCGAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAA 12849
Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACC 156157
|||| ||||| |||| | ||| || ||||| |||||||| ||| ||| | || ||
Sbjct 12848 CACACGCAGCATGGGAACGACACCGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCC 12789
Query 156158 AGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAG 156216
| | || | || | | | ||||||||||| | |||| || ||||| |
Sbjct 12788 GGTGGCACGGATTCGGTGGACGTTCAAGCCAATACCACCAG-CCATCTTGGAAATCATGG 12730
Query 156217 CGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGAT 156276
| || ||| | |||| | | ||||| || || || || | ||| | ||
Sbjct 12729 CACAAGTCTTGAGGGTATCGTAGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGA 12670
Query 156277 AGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAA 156336
|||| || | ||||| | || || ||||||||||||||||| || | ||||||
Sbjct 12669 AGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAG 12610
Query 156337 TAAAATACTTATTAGACATATAATCGTATGTCTCC 156371
| || |||| ||||||| | ||||||||||
Sbjct 12609 TGAAGAACTTGCTAGACATGAGGTTGTATGTCTCC 12575
>seq749
Length=34486
Score = 84.2 bits (92), Expect = 6e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 354016 GCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACG 354075
|| ||| |||| || ||||| ||||| | ||| |||||||| |||||||| | |||||
Sbjct 3354 GCAAGACCACCGAGAGAGTCTCGGTCCAAGAAGTTAGTAGGCTCGTCAAGCACAAGAAGA 3295
Query 354076 TGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134
|| || | ||||||| ||| | || | || ||||| ||||||||||| || || ||
Sbjct 3294 TGGGGGTTGTTCCACATGGCTCCGGCAATGACGACCTTCACCTTCTGTCCACCAGAAAG 3236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471787691746482
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