Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq670 138 1e-26
seq839 118 1e-20
seq700 102 1e-15
seq557 96.9 4e-14
>seq670
Length=49916
Score = 138 bits (152), Expect = 1e-26
Identities = 96/109 (88%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| | |||||||||||||| ||||| || ||||| | || |||||| |||| ||||||
Sbjct 23056 GCCTCTAACTACCTCGACATTAAGCCCCTTCTCGACGTCGGATGCAAGACTGTCGCCAAC 22997
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 22996 ATGATCAAGGGCAAGTCACCAGAGGAGATCCGCAAGACCTTTAACATCA 22948
>seq839
Length=23613
Score = 118 bits (130), Expect = 1e-20
Identities = 206/300 (69%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| || || |||| ||| || || || |||||||| |||| ||||| ||
Sbjct 12878 CTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACCGTTAGA 12819
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|| ||||| || || | ||| | ||||| ||| || | ||| || |||||
Sbjct 12818 AGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTTCAAGCC 12759
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || ||| |||||| || | || || ||||| || |||||||| || ||
Sbjct 12758 AATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTC 12699
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||| ||||||| || || || ||||| || || || || || | || ||
Sbjct 12698 GATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACC 12639
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|||||||| || ||||| | || ||||| |||| | |||||| || ||| ||
Sbjct 12638 AGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAGGTTGTATGT 12579
>seq700
Length=246488
Score = 102 bits (112), Expect = 1e-15
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || | || ||| ||||||||||||||||||||| | || |||||
Sbjct 28284 GCCTTCTGGTAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATG 28225
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | |||||| ||| ||| ||||| | ||
Sbjct 28224 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGGGCGACG 28165
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866
||||| || || ||||| |||||||||||||| ||||||| | |||||||||
Sbjct 28164 AGCAGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCC 28109
Score = 87.8 bits (96), Expect = 2e-11
Identities = 201/292 (69%), Gaps = 17/292 (6%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTT-GCTAAAGGCGAGGCCGGGCATGAGGCCGCGCT 869237
||| ||||| ||| ||| | ||||| | |||| | || ||||||||||| || ||||
Sbjct 27970 ACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTC-AGACCGGGCATGAGACCACGCT 27912
Query 869238 TCTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGC 869295
|||||||||| || ||| | || || || ||| ||| ||||| ||||| || || ||
Sbjct 27911 TCTTGAGCCAGAAAATG--GAAGCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGC 27854
Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCAT 869352
|||| | | || |||| ||||||| | ||| | |||| | |||||| ||
Sbjct 27853 AAAGGCAACAAGACGCTGGGCAAAG--GAAGAG----TTCTTGTCCTGGATCCATCGAAT 27800
Query 869353 CGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGT 869411
||||| || ||||| || | | | || | ||||| | |||| ||||||| ||
Sbjct 27799 AGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGGTAAGT 27740
Query 869412 CCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
| | | || || ||||||| |||||||| || || || || || || ||
Sbjct 27739 TC-TCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTTTC 27689
>seq557
Length=292410
Score = 96.9 bits (106), Expect = 4e-14
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||| ||||| || || || || || ||||| | ||| | || |||||||||
Sbjct 273764 GACAGCACTGGCGGTACCGTCACCTGTGTCATCCGCAATGCGCCCTCTGGTCTCGGCGAG 273823
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| | ||||| | ||||||||||||||| |||| ||||| ||| |
Sbjct 273824 CCTTGCTTCGACAAGCTGCAGGCCACCCTCGCCCACGCCATGATGTCCATCCCCGCCGTC 273883
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192
|||| || ||| | ||| ||| ||
Sbjct 273884 AAGGCCTTTGAGCTAGGCTCCGGCTT 273909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107009045412762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |