Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq391 141 6e-29
seq1088 122 6e-23
seq1221 102 5e-17
>seq391
Length=65998
Score = 141 bits (156), Expect = 6e-29
Identities = 163/217 (75%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| ||| |||||||||||||| ||||| || ||| ||||| | ||
Sbjct 44689 AGGACGAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGCCCGTCC 44748
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| |||| ||| |||||||| | || | |||||||||||
Sbjct 44749 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 44808
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| ||| | |||||| |||| ||| ||
Sbjct 44809 TGAATCTTGGACTTGAC--AT--TGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGAT 44864
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||||| || ||||||||||| |||||||| ||||||
Sbjct 44865 GGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCATG 44901
Score = 140 bits (154), Expect = 2e-28
Identities = 162/216 (75%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||||| ||| ||||||||| ||||| ||||| || ||| |||| ||||
Sbjct 44461 AGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 44520
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| |||| ||| |||||||| | || | |||||||||||
Sbjct 44521 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 44580
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| ||| | |||||| |||| ||| ||
Sbjct 44581 TGAATCTTGGACTTGAC--AT--TGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGAT 44636
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || ||||||||||| || || || |||||
Sbjct 44637 GGTCTTGCCGGTGAGGGTCTTGACGAATATTTGCAT 44672
>seq1088
Length=144876
Score = 122 bits (134), Expect = 6e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||||||||| ||||| ||||| ||| |||| ||||
Sbjct 60696 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 60637
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| ||||| |||||||| | || | |||||||||||
Sbjct 60636 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 60577
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || |||| ||| || |||
Sbjct 60576 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 60517
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
|| ||||| |||||||| || || |||||||||||
Sbjct 60516 TTCCCCGTAAGGGTCTTGACGAAAATCTGCATGAT 60482
>seq1221
Length=114529
Score = 102 bits (112), Expect = 5e-17
Identities = 135/185 (73%), Gaps = 8/185 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| | || |||| || || ||||| || |||||||
Sbjct 56452 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 56393
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| |||||||| | || | ||||||||||| | || || ||||| ||
Sbjct 56392 TCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 56336
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || || |||||| || | ||| |||||||| ||||| ||||||||
Sbjct 56335 -TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 56277
Query 34964 ACAAA 34968
|| ||
Sbjct 56276 ACGAA 56272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325686504561734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |