Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-13 >seq2 Length=329948 Score = 93.3 bits (102), Expect = 3e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||||||| | |||| || |||||||| |||||||||||| | ||||||||| Sbjct 322417 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 322476 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || ||||| |||| | || || | ||| | || || ||||| |||| || || Sbjct 322477 ACCGTCATTACGGGTGATGCCAACCTTTCGCTCCACGAGGTCGGTGTGCCTCGCAGCATC 322536 Query 432408 GCGAAAAATCTTACTT 432423 || | | ||||||| Sbjct 322537 GCCAGGACCCTTACTT 322552 Score = 93.3 bits (102), Expect = 3e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || ||||||||||| | ||||||||||| |||||| | ||| |||| || | || ||| Sbjct 323860 GAGTTTTTCTTCCACGCCATGGCTGGTCGAGAAGGTCTGATTGATACTGCAGTCAAGACT 323919 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATT 435243 ||||| |||||||||||||| || | | |||||| ||||||||| || Sbjct 323920 GCTGAAACTGGTTATATTCAGCGACGATTGGTCAAGGCTCTTGAAGATCTT 323970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740552534102436