Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 3e-13
>seq2
Length=329948
Score = 93.3 bits (102), Expect = 3e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| ||||||||| | |||| || |||||||| |||||||||||| | |||||||||
Sbjct 322417 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 322476
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || ||||| |||| | || || | ||| | || || ||||| |||| || ||
Sbjct 322477 ACCGTCATTACGGGTGATGCCAACCTTTCGCTCCACGAGGTCGGTGTGCCTCGCAGCATC 322536
Query 432408 GCGAAAAATCTTACTT 432423
|| | | |||||||
Sbjct 322537 GCCAGGACCCTTACTT 322552
Score = 93.3 bits (102), Expect = 3e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| ||||||||||| | ||||||||||| |||||| | ||| |||| || | || |||
Sbjct 323860 GAGTTTTTCTTCCACGCCATGGCTGGTCGAGAAGGTCTGATTGATACTGCAGTCAAGACT 323919
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATT 435243
||||| |||||||||||||| || | | |||||| ||||||||| ||
Sbjct 323920 GCTGAAACTGGTTATATTCAGCGACGATTGGTCAAGGCTCTTGAAGATCTT 323970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740552534102436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |