Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1088 131 2e-25
seq1221 116 4e-21
seq391 111 2e-19
>seq1088
Length=144876
Score = 131 bits (144), Expect = 2e-25
Identities = 150/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| |||| || ||| | | | |||||||||||||| ||
Sbjct 60681 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 60623
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| || || ||||| |||||||| |||||| |||
Sbjct 60622 AGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 60563
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||||| | |||||| || | ||||| || || || || || ||
Sbjct 60562 GACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTAAGGGT 60503
Query 133643 TTTTACGAAAATCTGCATG 133661
|| |||||||||||||||
Sbjct 60502 CTTGACGAAAATCTGCATG 60484
>seq1221
Length=114529
Score = 116 bits (128), Expect = 4e-21
Identities = 121/158 (77%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||||||||||||||| ||| | || | ||||||||||| || |||||||| ||||||
Sbjct 56417 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 56358
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | || ||| || |||| ||||| |
Sbjct 56357 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 56298
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGC 133663
|| ||||| ||||| || || |||||| ||| |||||
Sbjct 56297 GTCTTGCCCGTCAGGGTCTTCACGAAA--CTGGATGGC 56262
>seq391
Length=65998
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| | ||| | | | || ||||||||||||||
Sbjct 44476 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCGAGCTGCTTGCC 44534
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | ||||||||||| ||||| ||||| |||||||| ||||| |||
Sbjct 44535 GGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 44594
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | || || | | ||| || || | ||||| ||| |||||||| || ||
Sbjct 44595 GACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGT 44654
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| || |||||
Sbjct 44655 CTTGACGAATATTTGCAT 44672
Score = 111 bits (122), Expect = 2e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||| || || ||||| || ||||| || || ||| | |||||| |||||
Sbjct 44697 ATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCAAGCTG 44756
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| ||| |||| | ||||||||||| ||||| ||||| |||||||| |||||
Sbjct 44757 CTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTT 44816
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||||| | || | || || | | ||| || || | ||||| ||| ||||||||
Sbjct 44817 GGACTTGACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 44876
Query 133637 CAGAGTTTTTACGAAAATCTGCATGG 133662
|| || || || || || |||||||
Sbjct 44877 GAGGGTCTTGACAAAGATTTGCATGG 44902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483411216182640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |