Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq788 89.7 1e-12 >seq788 Length=215759 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/150 (74%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 352851 TTGGAGACAAGTTCGCTTCTCGATCTGCTCAAAAAGGAACAATTGGAATGTTGCTCAGTG 352910 |||| |||||||| |||||||| | |||||| || ||||| || |||| || | | Sbjct 93732 TTGGTGACAAGTTTGCTTCTCGTCACGGTCAAAAGGGTACAATCGG--TGTTACTTATCG 93789 Query 352911 AAAAG--GATATGCCTTTCGACAAAAATGGCTTAAAACCTGACATTATTATTAATCCAAA 352968 | ||| |||||||||||| || | | || || | |||||||||||| || || || | Sbjct 93790 ACAAGAGGATATGCCTTTCAGCAGAGAAGGTTTGACACCTGACATTATCATCAACCCTCA 93849 Query 352969 TGCGATTCCCTCTAGAATGACAATAGCTCA 352998 || ||||| ||| | |||||||| || || Sbjct 93850 CGCCATTCCGTCTCGTATGACAATTGCCCA 93879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186788683222146