Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq391 125 7e-24
seq1088 116 4e-21
seq1221 89.7 5e-13
>seq391
Length=65998
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||| ||||| || ||||||||||||
Sbjct 44446 CCACCGCGGAGACGGAGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 44505
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| ||||| || |||||||| |||||||| || || ||
Sbjct 44506 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 44565
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | || || || || || ||
Sbjct 44566 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGACC 44625
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || ||||| | || || ||||| ||||||||
Sbjct 44626 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAATATTTGCAT 44672
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || || |||||||| |||||||||||||| | |||| | ||| ||
Sbjct 44692 ACGAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCA 44751
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || |||||||| |||||||| || || || ||||| || || || |||
Sbjct 44752 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 44811
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | || || || || || || || || || ||||| ||
Sbjct 44812 ATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTG 44871
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || || || ||||||||
Sbjct 44872 CCGGTGAGGGTCTTGACAAAGATTTGCAT 44900
>seq1088
Length=144876
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||| ||||| || |||||||||||||
Sbjct 60711 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 60652
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| || || ||||| || | |||||||| || || ||
Sbjct 60651 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGA 60592
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | |||||||| || |||||
Sbjct 60591 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 60532
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || | || || |||||||| |||||
Sbjct 60531 TCAAGGGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 60485
>seq1221
Length=114529
Score = 89.7 bits (98), Expect = 5e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | ||| | || |||||||| ||||| || || |
Sbjct 56452 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 56393
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
|||| |||||||| || || || ||||| || || || || || || ||||| ||
Sbjct 56392 TCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 56333
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || ||||| || ||||| || || || | || || ||||
Sbjct 56332 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 56273
Query 134704 AA 134705
||
Sbjct 56272 AA 56271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505388380476720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |