Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq700 147 3e-30
>seq700
Length=246488
Score = 147 bits (162), Expect = 3e-30
Identities = 368/558 (66%), Gaps = 6/558 (1%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| ||||| || || ||||| || | | || | |||||||| || || ||
Sbjct 27991 GCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAG 27932
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| ||||||||||| |||||||| || |||| |||||| | || |||||
Sbjct 27931 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAA 27872
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCT---CTCCGTAACTTGTATCATTATG 39792
||| || || || || ||||| |||||||| | || | | || | | | ||
Sbjct 27871 GATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTG 27812
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
||||| ||||||||||| ||||| | ||||| || || || | || ||
Sbjct 27811 GATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTT 27752
Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912
||||| ||| | | | | || || || | || || || || | |||| || |
Sbjct 27751 GAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGT 27692
Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972
||| || |||||||| || ||| ||||| || ||||| || |||| || |||| ||
Sbjct 27691 TTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGAT 27632
Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032
|| ||||| | |||| || | | || || || || || ||||| |||||
Sbjct 27631 CTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGGC 27572
Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCA 40089
||| || || | | || || || || | || || | || | || |||||
Sbjct 27571 AAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCCA 27512
Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149
||||| || ||| || || | ||| | || || |||||||| || || ||||| |||||
Sbjct 27511 GTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCGGCCTT 27452
Query 40150 TTTGTACATGTTCCATAT 40167
|||||||| | ||| ||
Sbjct 27451 CTTGTACATTTGCCAGAT 27434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686895182033040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |