Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq700 147 3e-30 >seq700 Length=246488 Score = 147 bits (162), Expect = 3e-30 Identities = 368/558 (66%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| || || ||||| || | | || | |||||||| || || || Sbjct 27991 GCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAG 27932 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||||||||| |||||||| || |||| |||||| | || ||||| Sbjct 27931 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAA 27872 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCT---CTCCGTAACTTGTATCATTATG 39792 ||| || || || || ||||| |||||||| | || | | || | | | || Sbjct 27871 GATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTG 27812 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| ||||||||||| ||||| | ||||| || || || | || || Sbjct 27811 GATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTT 27752 Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912 ||||| ||| | | | | || || || | || || || || | |||| || | Sbjct 27751 GAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGT 27692 Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972 ||| || |||||||| || ||| ||||| || ||||| || |||| || |||| || Sbjct 27691 TTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGAT 27632 Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032 || ||||| | |||| || | | || || || || || ||||| ||||| Sbjct 27631 CTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGGC 27572 Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCA 40089 ||| || || | | || || || || | || || | || | || ||||| Sbjct 27571 AAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCCA 27512 Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149 ||||| || ||| || || | ||| | || || |||||||| || || ||||| ||||| Sbjct 27511 GTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCGGCCTT 27452 Query 40150 TTTGTACATGTTCCATAT 40167 |||||||| | ||| || Sbjct 27451 CTTGTACATTTGCCAGAT 27434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686895182033040