Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq839 228 1e-54
seq700 102 1e-16
>seq839
Length=23613
Score = 228 bits (252), Expect = 1e-54
Identities = 558/837 (67%), Gaps = 19/837 (2%)
Strand=Plus/Minus
Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310
||||||||||| |||||| | | |||||| | ||| || || || | ||||||
Sbjct 13348 TTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAG 13289
Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370
|| || || || | ||||||||||| ||||| |||||| |||||||||||||
Sbjct 13288 CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGC 13229
Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGC 111429
||| | || | || ||||| ||||| | | |||||| || | ||||| | || | | |
Sbjct 13228 ATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAGCTTCTGAGCC 13169
Query 111430 TGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487
| | || | | ||| ||| | ||||| ||||||||| ||| || || || |||
Sbjct 13168 TTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCCTCGAAC 13112
Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547
|| ||||| ||| | ||||| || || || || || | ||||| |||||
Sbjct 13111 TCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCG 13052
Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607
||| | ||| || ||||||||||| || || || ||||| |||| || || ||
Sbjct 13051 CCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAGGAACAGGTCA 12992
Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667
| | || |||| || | ||| ||||| ||| | ||||||||||| | || |||
Sbjct 12991 CGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCG 12932
Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGA 111721
|||||||| ||||| || |||| |||| || || ||| | | ||| | ||
Sbjct 12931 GCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTT--GTTG-CCACCCTGG 12875
Query 111722 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 111781
| || || || || ||| ||| || || || ||||| |||| | ||| | || |
Sbjct 12874 TCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACCGTTAGAAGTA 12815
Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 111841
||||| ||||| ||| ||| |||| | | |||| || || ||||||
Sbjct 12814 CCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTTCAAGCCAATA 12755
Query 111842 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901
|| |||||| ||| || || ||||| | | || || | |||||||||| |||
Sbjct 12754 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCGATG 12695
Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961
||||||||| | | | ||||||||| ||||| ||| || || ||||||||
Sbjct 12694 CTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCG 12635
Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCT 112019
||||| || || || | || ||| ||| | | |||| ||||| || ||||||||
Sbjct 12634 TTGAATAGTGTGGGGGAAGCATGAGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCT 12577
Query 112020 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076
|||||||| || || || || || ||| || | || || ||||||| |||||
Sbjct 12576 CCAAGACACGTTCGATATCATCACCCCAGATACCAACAGCAACACGCATGATCATGT 12520
>seq700
Length=246488
Score = 102 bits (112), Expect = 1e-16
Identities = 302/459 (66%), Gaps = 20/459 (4%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| | || |||||||| || ||||||||||| ||| |||| ||||| |||||
Sbjct 28275 TAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCCATG 28216
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484
||||| || || || | || || | | | | || | | | || |||
Sbjct 28215 AAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGGGCGAC------GAGC 28162
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|||||||| | || |||| ||||||| ||| | |||||||| || | ||
Sbjct 28161 AGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGA 28102
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
||| ||||| || || || |||| | |||||| ||| || || | | ||||
Sbjct 28101 GCACAAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATG 28042
Query 122605 GCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661
| ||||| | | | ||| ||| || | || | || ||| || ||||
Sbjct 28041 TCCTGGATCATCTGCTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 27985
Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721
|| || ||| |||||||| || || || || || || || ||||| ||||| |||
Sbjct 27984 AAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGGC 27925
Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 122780
|||||||| |||||||| | ||| |||| | ||| || | ||| ||||||||||||
Sbjct 27924 ATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCA-AAGGCACCGCTGAAGAAGATACC 27866
Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819
||| ||| ||||| |||| ||| || | ||| |||||
Sbjct 27865 CTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGA 27827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628019549265600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |