Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq700 159 4e-34
>seq700
Length=246488
Score = 159 bits (176), Expect = 4e-34
Identities = 538/819 (66%), Gaps = 29/819 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786
||||| |||| ||||||||||| ||||| ||||| || ||||| ||| ||||||||
Sbjct 28275 TAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCA-CCAAGAGAGATGTTCTCCAT 28217
Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGAC 129845
|| || || ||||| | | || | | | || | | | | ||| ||||
Sbjct 28216 GAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGGGCGAC-GAGCAGAC 28158
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
|||| | |||| |||| ||||||| ||| | |||||||| || | || ||
Sbjct 28157 GATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGAGCAC 28098
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
| ||||| || || || |||| || ||||||| || || || | |||| | |
Sbjct 28097 AAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATGTCCT 28038
Query 129966 GAATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 130022
| || ||| | ||| || ||| ||| | || | || ||| || |||||| |
Sbjct 28037 GGATCATCTGCTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGT 27981
Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082
| ||| |||||||||||||| |||||||| || || ||||| |||||| |||||||
Sbjct 27980 CGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGGCATGA 27921
Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142
|||| |||||||| | ||||||||| | | ||| | || ||||||||| ||||| |
Sbjct 27920 GACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCAA 27861
Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTT----TGTATCAAACCAC 130198
|| || || |||| ||||||| |||||||| | ||| || ||| | | |
Sbjct 27860 CAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCCATCGA- 27802
Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 130258
|| ||||| | ||||| || ||| || || | ||| | | || | |||||
Sbjct 27801 ---ATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGG 27745
Query 130259 TCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316
| || ||||| || || |||||||| | || ||||| || |||||||||
Sbjct 27744 T--AAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTTTCGG 27687
Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375
|||| | | ||| || | ||| | ||||||| | || || || |||||
Sbjct 27686 AGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGATCTGA 27628
Query 130376 ACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434
||||| | || ||| | | | | ||||| ||||| |||||||| | |||||
Sbjct 27627 ACCTC-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGGCAAA 27569
Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTC-GTT--CAGGGTCTTCCAGTC 130491
|| || || || | ||||| | ||| || | | | ||| || | ||||||||
Sbjct 27568 GAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCCAGTC 27509
Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
| |||||||| || ||||| | |||||| || |||||
Sbjct 27508 ATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 27470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618422939522160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |