Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq700 159 4e-34 >seq700 Length=246488 Score = 159 bits (176), Expect = 4e-34 Identities = 538/819 (66%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 ||||| |||| ||||||||||| ||||| ||||| || ||||| ||| |||||||| Sbjct 28275 TAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCA-CCAAGAGAGATGTTCTCCAT 28217 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || ||||| | | || | | | || | | | | ||| |||| Sbjct 28216 GAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGGGCGAC-GAGCAGAC 28158 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 |||| | |||| |||| ||||||| ||| | |||||||| || | || || Sbjct 28157 GATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGAGCAC 28098 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | ||||| || || || |||| || ||||||| || || || | |||| | | Sbjct 28097 AAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATGTCCT 28038 Query 129966 GAATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 130022 | || ||| | ||| || ||| ||| | || | || ||| || |||||| | Sbjct 28037 GGATCATCTGCTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGT 27981 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 | ||| |||||||||||||| |||||||| || || ||||| |||||| ||||||| Sbjct 27980 CGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGGCATGA 27921 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 |||| |||||||| | ||||||||| | | ||| | || ||||||||| ||||| | Sbjct 27920 GACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCAA 27861 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTT----TGTATCAAACCAC 130198 || || || |||| ||||||| |||||||| | ||| || ||| | | | Sbjct 27860 CAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCCATCGA- 27802 Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 130258 || ||||| | ||||| || ||| || || | ||| | | || | ||||| Sbjct 27801 ---ATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGG 27745 Query 130259 TCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316 | || ||||| || || |||||||| | || ||||| || ||||||||| Sbjct 27744 T--AAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTTTCGG 27687 Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375 |||| | | ||| || | ||| | ||||||| | || || || ||||| Sbjct 27686 AGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGATCTGA 27628 Query 130376 ACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434 ||||| | || ||| | | | | ||||| ||||| |||||||| | ||||| Sbjct 27627 ACCTC-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGGCAAA 27569 Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTC-GTT--CAGGGTCTTCCAGTC 130491 || || || || | ||||| | ||| || | | | ||| || | |||||||| Sbjct 27568 GAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCCAGTC 27509 Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 | |||||||| || ||||| | |||||| || ||||| Sbjct 27508 ATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 27470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618422939522160