Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq839 403 2e-107 seq700 105 7e-18 >seq839 Length=23613 Score = 403 bits (446), Expect = 2e-107 Identities = 1139/1731 (66%), Gaps = 45/1731 (3%) Strand=Plus/Minus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 14241 GTGTACGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGCATGC 14182 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || | Sbjct 14181 TGGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 14122 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 | | ||||| |||||||| ||||| | | ||| || | ||||||||| | | Sbjct 14121 TAAAGGCACCACGGTCGGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 14062 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425 || ||| | ||||| | || | |||||| | | ||| | | | |||| Sbjct 14061 TCTTGTACAGAGCCTTGACATCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 14005 Query 78426 TCGCA-CAATTTCA---TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481 || || |||| | ||||| || | | ||| || || | ||||||| Sbjct 14004 TCTCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 13945 Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537 || ||||| |||| | | ||||||||| || ||| ||||| ||||| Sbjct 13944 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 13889 Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCG 78597 ||||||| || || |||||||| ||||||||| || | ||||| | ||| ||| Sbjct 13888 ATGTTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCA 13829 Query 78598 GTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTT 78657 || ||||| || || || || ||| || || | ||| || ||||||| || | Sbjct 13828 GTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGG 13769 Query 78658 AGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATA 78711 ||| | ||||||| ||| | | || ||||||||| || || ||| Sbjct 13768 AGGGATTCCCACTCCCAAAGGTCAGAAGGCTTGACATTCCACATGTCAAACTGGAGAATA 13709 Query 78712 CCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCG 78771 ||||| || || || || |||||||| || ||| | ||||||||||||||||| | Sbjct 13708 CCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGT 13649 Query 78772 CATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGC 78831 || | ||||| |||||||| | | ||||||||| |||||| ||||| || Sbjct 13648 ACAGAAGTGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGA 13589 Query 78832 GCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACG 78891 |||| || || || | | || ||| | |||| |||| || || || || || Sbjct 13588 GCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGAACA 13529 Query 78892 CCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAG 78951 || | | | || |||||||| ||||||||||| || || ||| | | | ||||| | Sbjct 13528 CCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGGACAGGGTAGTGG 13469 Query 78952 TTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTG 79011 ||| ||||| | ||||||||| || ||||| |||| ||||||| || || Sbjct 13468 TTCACGTCGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTC 13409 Query 79012 GCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCAGG 79065 ||| || | | || ||| | |||||||||| || || ||| || || ||| Sbjct 13408 TTGAAGTCGTAGACAGCATCTTCGTAGTTGATGAAAGAGGGCAGAGACAAGGAGGCAAGG 13349 Query 79066 TTGCACACGGCCGTCTCGTCCGG-GCT-AGAAACCTCGATGATTTCTGTGCACAAATTAG 79123 ||||| || || ||| || || || || | ||| || || || ||||||| || | Sbjct 13348 TTGCAAACAGCGACCTCATCAGGAGCGCAGTA--CTCAATAATCTCAGTGCACAGGTTGG 13291 Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181 | ||| |||||| || | |||||| ||||||||||| ||| ||| |||||||| Sbjct 13290 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTA 13233 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241 | |||| | || | || ||||| ||| || ||||| | | | ||| | | | | Sbjct 13232 GAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAGCTTCTG 13173 Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301 ||| || | ||| | ||||| | ||||| || ||||| | | ||| Sbjct 13172 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCCTCGAA 13113 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || ||| || | || || |||||||||| |||||||| || ||| || Sbjct 13112 CTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTC 13053 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 | | |||||| || || ||||||||| || |||||||| |||||| ||| ||||| Sbjct 13052 GCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAGGAACAGGTC 12993 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 || || | |||||| | || |||||| || || || || || || | || || Sbjct 12992 ACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATC 12933 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||| ||||| || ||||| ||||| | ||| |||||| ||| ||||||| Sbjct 12932 GGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTTGCCACCCTGGTC 12873 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 |||||| || || ||||||||||| || || |||||||| |||| |||| | || Sbjct 12872 GACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACCGTTAGAAGTACC 12813 Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGC 79660 || |||||| || | ||| | || || || | | | | || | || || | Sbjct 12812 ATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGAT-TCGGTGGACGTTCAAGCCAATAC 12754 Query 79661 CCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCG 79720 | || | | |||||| || || || |||||| || |||||||| || ||||| Sbjct 12753 CACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCGATGC 12694 Query 79721 AGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGT 79780 ||| ||||||||| | || |||||||| |||| ||| || | ||||| |||| Sbjct 12693 TGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCGT 12634 Query 79781 TGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCT---CATCAGATCGTACGTCT 79837 |||| || || || | || || ||||||||||| ||| ||| || | ||| |||| Sbjct 12633 TGAATAGTGTGGGGGAAGCATGAGTGAAGAACTT---GCTAGACATGAGGTTGTATGTCT 12577 Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || ||| || || || || || ||| || || || || ||||||| Sbjct 12576 CCAAGACACGTTCGATATCATCACCCCAGATACCAACAGCAACACGCATGA 12526 Score = 338 bits (374), Expect = 7e-88 Identities = 918/1387 (66%), Gaps = 26/1387 (2%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 ||||| || | ||||||| || || || || ||| || || || || || ||| Sbjct 12513 CCTCAACACATGATCATGCGTGTTGCTGTTGGTATCTGGGGTGATGATATCGAACGTGTC 12572 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 ||||||||| |||| ||| | || ||||||||||| || || | || || || || Sbjct 12573 TTGGAGACATACAACCTCATGT-CTAGCAAGTTCTTCACTCATGCTTCCCCCACACTATT 12631 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 |||||| ||||| | || ||| |||| || ||||| || | ||||||||| || Sbjct 12632 CAACGCTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTGATATGAAGGAGGA 12691 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 |||||| || || |||||||| || |||||| || || || |||||| | | || Sbjct 12692 CAGCATCGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGG 12751 Query 19342 GGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGA 19400 ||||| || | || | | | | ||||| | | || | || ||||| | Sbjct 12752 TGGTATTGGCTTGAACGTCCACCGA-ATCCGTGCCACCGGCTCTTACATTGCCGGGACCA 12810 Query 19401 ACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACG 19460 | || | ||||| |||| || ||||| || || ||||||||||| || | |||| Sbjct 12811 ATGGTACTTCTAACGGTGTCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACG 12870 Query 19461 TCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520 || ||||||| ||| ||| || || | ||||| |||||||||||||| ||||||| Sbjct 12871 TCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTCGAGCCCTGGCACG 12930 Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580 | || ||| | || ||||| || || || |||||| ||| | |||||| | ||| || Sbjct 12931 CCGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCTC 12990 Query 19581 GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACG 19640 | ||||| ||| |||| | ||||| || || || |||||| || || |||||| | | Sbjct 12991 GTGACCTGTTCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAATG 13050 Query 19641 AAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGG 19700 |||||| || |||||||| |||| |||||||| || | ||| |||||| || | Sbjct 13051 GCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATG 13110 Query 19701 CGTTCAATGAGTTGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGG 19759 |||| | | ||||| || |||| || || || || ||| || | Sbjct 13111 AGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAG 13169 Query 19760 GCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATG 19819 || | | | | ||| | | | ||| | |||| ||||| || | || | |||| Sbjct 13170 GCTCAGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGGAAACCCTTTCATG 13229 Query 19820 TGCTACAAGGA-CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAG 19876 ||||||||| | | || ||| |||| || || |||||| | || | ||| ||| Sbjct 13230 CTCTACAAGGATCACTGC-AACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAG 13288 Query 19877 TCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGT 19936 ||||||||||| ||||| || || ||| | | || || ||| || || || Sbjct 13289 --CTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCTCCTGATGAGGTCGCTGTTTGC 13346 Query 19937 AATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCC-----TCCT-CCTTCGACTTT 19990 || || || ||| ||| ||||| ||||| |||| | | || || |||||| Sbjct 13347 AACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTACGAAGATGCTGTCTACGACTTC 13406 Query 19991 GCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGG 20050 || || ||||||| || | ||||| || || ||||| | ||||| | Sbjct 13407 AAGAAGCTGCACGAGGTCACTCAAGTCGTTGTCCGCAACCTGAACAAGATTATCGACGTG 13466 Query 20051 AACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATC 20110 ||| ||||| | | | ||| ||||| || ||||| ||||| || || | | Sbjct 13467 AACCACTACCCTGTCCAAGAGGCTCGCAACAGCAACATGCGTCACCGACCCATTGGTCTT 13526 Query 20111 GGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAG 20170 || || || || || || || | ||| | ||| || | | || || |||| || Sbjct 13527 GGTGTTCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCCCTTTGAGTCTCCCGAG 13586 Query 20171 GCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATC- 20229 || || ||||| |||||| ||||||||| || | |||||||| ||||| || Sbjct 13587 GCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACCACTTCT 13646 Query 20230 GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGA 20289 || | | |||||||| ||||| || || ||| || |||||||| || || || || || Sbjct 13647 GTAC-AGCTCGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTCCTGCCTCTGA 13705 Query 20290 GGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGA-GTTTTGGAGCG-----C 20343 |||||| |||||| ||||||||| |||| ||| ||| |||| | | Sbjct 13706 GGGTATTCTCCAGTTTGACATGTGGAATGTCAAGCCTTCTGACCTTTGGGAGTGGGAATC 13765 Query 20344 CCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCC 20403 |||| | || ||||||| ||||| | |||||| ||||||| || || ||||| Sbjct 13766 CCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCC 13825 Query 20404 GACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAA 20463 || ||| ||| | ||||| | || ||||||||| |||||||| || || |||| Sbjct 13826 TACTGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTATACCTCCAA 13885 Query 20464 CATCTAC 20470 ||||||| Sbjct 13886 CATCTAC 13892 >seq700 Length=246488 Score = 105 bits (116), Expect = 7e-18 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 59970 TCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTC 60028 || ||||| || ||||| | || ||||| ||| || || || ||||||||| || | Sbjct 27827 TCCTTTGCCCAGCGTCTTGTTGCCTTTGC-TGCTGTTGAGGGTATCTTCTTCAGCGGTGC 27885 Query 60029 GTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAA 60088 || | | |||||||||||||| |||||||| |||||||| || |||| |||||| || Sbjct 27886 CTTTGCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAA 27945 Query 60089 CGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||||| || || || |||||||| || || Sbjct 27946 CGAGCTCATCTCTCGTGACGAGGGTCTTCA 27975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548513925495840