Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq839 248 1e-60 seq391 203 4e-47 seq1088 179 4e-40 seq933 129 7e-25 seq1221 120 3e-22 seq700 100 3e-16 >seq839 Length=23613 Score = 248 bits (274), Expect = 1e-60 Identities = 1122/1749 (64%), Gaps = 61/1749 (3%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || || || ||||||||||| |||||||| || ||||||||| | |||| Sbjct 14245 GCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGC 14186 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || ||| ||| | | ||| |||| || |||| ||||| ||||||||||||||| Sbjct 14185 ATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 14126 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCAT-TTCAATAATTGACTTTTGTGGAATTTCCCA 80210 || || || ||||| || || ||||| | || | || | || | ||| ||||| Sbjct 14125 TCAATAAAGGCACCACGGTCGGCAGCCATCTGCACAACCTGTC-GCTGAGAAATCTCCCA 14067 Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCC 80267 || || |||| |||| | || | || |||| | | | | | Sbjct 14066 CACAGTCTTGTACAGAGCCTT---GACATCGGCAGGGATGTTGGGGATGTTCTGGATAGA 14010 Query 80268 ACCGTCCTTTACA---ATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAG 80324 ||||| || || || | || |||| || | ||| | ||| | | | || Sbjct 14009 ACCGTTCTCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAG 13950 Query 80325 ATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAG 80381 ||| || | ||| | | ||| || | || ||||| || || ||| || || | Sbjct 13949 ATCCTTGAGAAGCCAGGGGTTGACAA-CCTG--GAACTCGCCAGCAAGGACTCGGCGTTG 13893 Query 80382 ATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCT 80441 || | ||| | || || ||||| || ||||||||| || || ||||| | || || Sbjct 13892 GTAGATGTTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACT 13833 Query 80442 CGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC 80501 || || ||||| || | || | ||| || || | ||||| |||||| |||||| Sbjct 13832 GGCAGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTC 13773 Query 80502 GCGCA---AATCTGA---CCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGC 80553 || | | || | ||||| ||| || ||| |||| ||||||||| | Sbjct 13772 TCGGAGGGATTCCCACTCCCAAAGGTCA----GAAGGCT-TGACATTCCACATGTCAAAC 13718 Query 80554 TGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG 80613 || | || ||||| || || ||||| ||| ||| || ||| || |||||| |||| Sbjct 13717 TGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTG 13658 Query 80614 GCCAGCT-CACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTT 80672 || |||| ||| || ||||||| ||||| || ||| ||| |||| |||||| Sbjct 13657 GCGAGCTGTACA-GAAGTGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 13599 Query 80673 CACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAG 80732 || | || |||| || || || | || || | | ||| | ||||| || Sbjct 13598 CAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAG 13539 Query 80733 GCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAA 80791 || ||||| || | | || || ||||| ||| |||| | | || ||||| | | Sbjct 13538 ACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGC-GAGCCTCTTGGA 13480 Query 80792 TTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACAT 80851 ||||| ||| ||||| | |||||||||||| ||| || | || || | Sbjct 13479 CAGGGTAGTGGTTCACGTCGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCT 13420 Query 80852 CATGAAGTTTCTGAAAGTCG--AATTGGTTCCCC----TTCACAAATGCCGGAAGGCTCA 80905 | || || |||| |||||| | | || | || | || | || || || Sbjct 13419 CGTGCAGCTTCTTGAAGTCGTAGACAGCATCTTCGTAGTTGATGAAAGAGGGCAGAGACA 13360 Query 80906 GGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGC 80965 ||| || || ||||| || || ||||| |||| | | |||| | || || |||| Sbjct 13359 AGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGC 13300 Query 80966 ACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGC 81023 ||| || || ||| || ||||| ||||| || ||||| |||| |||||| Sbjct 13299 ACAGGTTGGA--GCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTG 13242 Query 81024 GTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCA 81083 ||||||||| |||| | ||| | || ||||| ||| | || ||| ||||| | ||| Sbjct 13241 ATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCA 13182 Query 81084 AATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGC 81143 || || | ||||||| |||||| || || || | | ||||| |||| Sbjct 13181 AAGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAG 13122 Query 81144 TTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202 | ||||||| |||||| | || |||| || | ||||||||||| |||||||| | Sbjct 13121 AGCCTCGAACTCATCACCGTAGCAG-TCAGCAAGACCAGGGCACTCGTTGGGGCACATAA 13063 Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262 | ||| ||| | ||||| ||| ||||||||| ||||||||||| ||||| Sbjct 13062 GAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCA 13003 Query 81263 TGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320 ||||||||| || |||||| ||||||| | ||| ||||| || | || || || Sbjct 13002 GGAACAGGTCACG--AGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945 Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGCG 81374 || | || || || ||||| ||||| || || | |||| | || | |||| Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTG-- 12887 Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434 ||||||||||| ||||||||| ||||| ||| || ||||||| ||| || | || Sbjct 12886 -TTGCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAC 12828 Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGA- 81493 ||| | || ||| || || || | || || || |||| || | | || Sbjct 12827 ACCGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGAC 12768 Query 81494 TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553 | ||| || || ||||| | | ||| |||||| ||||| || | ||| || | Sbjct 12767 GTTCAAG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGT 12709 Query 81554 AAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGC 81613 | || || |||||||| || | ||||| |||| | ||| || |||| |||||| Sbjct 12708 AGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCT 12649 Query 81614 TTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCA 81673 | || || ||||| ||||| |||| || ||| |||| | | | ||||| | Sbjct 12648 GAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGA 12589 Query 81674 GGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCA 81733 ||| || || ||| ||| ||| ||||| ||||| ||||| | ||| ||||||| Sbjct 12588 GGTTGTATGTCTCCAAGACACGTTCGATATCATCACCCCAGATACCAACAGCAACACGCA 12529 Query 81734 TAAACATGT 81742 | | ||||| Sbjct 12528 TGATCATGT 12520 >seq391 Length=65998 Score = 203 bits (224), Expect = 4e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || ||||||||||| || || |||||||| ||||| | Sbjct 44672 ATGCAAATATTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCT 44613 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || ||||||||||||||||| |||||||| |||||| Sbjct 44612 GATACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 44553 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || ||||| ||||| |||| || ||||| | ||||| || Sbjct 44552 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTCTCCGACTACAAC 44493 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||||||||| || ||| | ||||| |||||||| || Sbjct 44492 ATCCAGAAGGAGTCCACTCTTCACCTGGTCCTCCGTCTCCGCGGTGGTCA 44443 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || ||||||||||| || || |||||||| ||||| | Sbjct 44900 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCT 44841 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || ||||||||||||||||| |||||||| |||||| Sbjct 44840 GATACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 44781 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || ||||| || ||||| | || ||||| | ||||| || Sbjct 44780 CAGCGATTGATTTTCGCCGGCAAGCAGCTTGAGGACGGGCGCACCCTGTCTGACTACAAC 44721 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || |||||||| ||| | || ||||||||||| Sbjct 44720 ATTCAGAAGGAATCAACCCTTCATCTCGTCCTCCGCCTTCGCGGTGG 44674 >seq1088 Length=144876 Score = 179 bits (198), Expect = 4e-40 Identities = 180/231 (78%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || |||||||| ||||| || ||||| || || |||||||| ||||| Sbjct 60482 ATCATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 60541 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||||| || | ||| | || || |||||||||||||| ||||| || ||| Sbjct 60542 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 60601 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTA 27581 |||||||| || || |||||||||||||| |||||||||| || ||||| ||| ||||| Sbjct 60602 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTA 60660 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| |||||||| || || ||| | || || || ||||| Sbjct 60661 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCTCCGCCTCCGTGGTGG 60711 >seq933 Length=180792 Score = 129 bits (142), Expect = 7e-25 Identities = 209/297 (70%), Gaps = 4/297 (1%) Strand=Plus/Plus Query 31991 TCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACA 32050 ||||||| || ||||||||||| ||||| ||| |||||| ||| || | |||| Sbjct 57479 TCAAGCCCGGTCAACGCAAGGTGATCTACGCGTGCTTCAAGAGAAACTTGATCAAAGACA 57538 Query 32051 TGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGG 32110 |||||| | | || | || || ||| | || |||||||| || |||||||| || Sbjct 57539 AGAAGGTTGTTGAATTGGCAGGTTATGTGTCCGAACAAACGGCATACCACCACGGTGAAC 57598 Query 32111 CGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGA 32170 ||| || || |||||| | ||||| |||||||| || ||| |||||||| | | Sbjct 57599 AGTCACTTCAACAGACCATTATTGGTCTTGCCCAGAACTTCGTGGGTTCAAATAACATCA 57658 Query 32171 ACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGA 32230 ||| || || || |||| | || || | || || || |||||| |||||||| | Sbjct 57659 ACTGCCTGGAACCTAGTGGAAACTTCGGTTCTCGTCTTGCAGGTGGCTCTGATGCTGCCA 57718 Query 32231 GCTCCCGTTACATCTTCACCCG--TCTCGCACCTTCGACGCGCAAGATTTTCGACCC 32285 | | ||||||| |||||||| | |||| | |||| | ||||| || ||| |||| Sbjct 57719 GTCCTCGTTACACGTTCACCCGATTGTCGC-CTTTCG-CCCGCAAAATCTTCCACCC 57773 >seq1221 Length=114529 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 56272 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 56331 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| || || || ||||||||||| | Sbjct 56332 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGATTG 56391 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| |||||||||| || ||||| | ||||| || |||| ||| Sbjct 56392 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 56451 Query 27595 G 27595 | Sbjct 56452 G 56452 >seq700 Length=246488 Score = 100 bits (110), Expect = 3e-16 Identities = 146/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGG---TCGTCGTTTGGTCAGCGT 64719 || |||||||| ||||| || || ||||| | | || || |||| |||||| Sbjct 27782 AAGAAGGCTGATTGGGCTATTCGATGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGT 27841 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 || | || ||||| ||| || || || ||||| || | || ||| |||||| Sbjct 27842 CTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTC 27901 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || || ||||| |||||| | || || |||||||| |||||||| Sbjct 27902 TGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGT 27961 Query 64840 GACGAGGGGCTCCACCAAGAATTTGC 64865 |||||||| || ||| || ||||| Sbjct 27962 GACGAGGGTCTTCACACCGACTTTGC 27987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570299093596320