Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq839 248 1e-60
seq391 203 4e-47
seq1088 179 4e-40
seq933 129 7e-25
seq1221 120 3e-22
seq700 100 3e-16
>seq839
Length=23613
Score = 248 bits (274), Expect = 1e-60
Identities = 1122/1749 (64%), Gaps = 61/1749 (3%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || || || ||||||||||| |||||||| || ||||||||| | ||||
Sbjct 14245 GCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGC 14186
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | ||| |||| || |||| ||||| |||||||||||||||
Sbjct 14185 ATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 14126
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCAT-TTCAATAATTGACTTTTGTGGAATTTCCCA 80210
|| || || ||||| || || ||||| | || | || | || | ||| |||||
Sbjct 14125 TCAATAAAGGCACCACGGTCGGCAGCCATCTGCACAACCTGTC-GCTGAGAAATCTCCCA 14067
Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCC 80267
|| || |||| |||| | || | || |||| | | | | |
Sbjct 14066 CACAGTCTTGTACAGAGCCTT---GACATCGGCAGGGATGTTGGGGATGTTCTGGATAGA 14010
Query 80268 ACCGTCCTTTACA---ATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAG 80324
||||| || || || | || |||| || | ||| | ||| | | | ||
Sbjct 14009 ACCGTTCTCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAG 13950
Query 80325 ATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAG 80381
||| || | ||| | | ||| || | || ||||| || || ||| || || |
Sbjct 13949 ATCCTTGAGAAGCCAGGGGTTGACAA-CCTG--GAACTCGCCAGCAAGGACTCGGCGTTG 13893
Query 80382 ATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCT 80441
|| | ||| | || || ||||| || ||||||||| || || ||||| | || ||
Sbjct 13892 GTAGATGTTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACT 13833
Query 80442 CGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC 80501
|| || ||||| || | || | ||| || || | ||||| |||||| ||||||
Sbjct 13832 GGCAGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTC 13773
Query 80502 GCGCA---AATCTGA---CCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGC 80553
|| | | || | ||||| ||| || ||| |||| ||||||||| |
Sbjct 13772 TCGGAGGGATTCCCACTCCCAAAGGTCA----GAAGGCT-TGACATTCCACATGTCAAAC 13718
Query 80554 TGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG 80613
|| | || ||||| || || ||||| ||| ||| || ||| || |||||| ||||
Sbjct 13717 TGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTG 13658
Query 80614 GCCAGCT-CACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTT 80672
|| |||| ||| || ||||||| ||||| || ||| ||| |||| ||||||
Sbjct 13657 GCGAGCTGTACA-GAAGTGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 13599
Query 80673 CACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAG 80732
|| | || |||| || || || | || || | | ||| | ||||| ||
Sbjct 13598 CAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAG 13539
Query 80733 GCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAA 80791
|| ||||| || | | || || ||||| ||| |||| | | || ||||| | |
Sbjct 13538 ACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGC-GAGCCTCTTGGA 13480
Query 80792 TTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACAT 80851
||||| ||| ||||| | |||||||||||| ||| || | || || |
Sbjct 13479 CAGGGTAGTGGTTCACGTCGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCT 13420
Query 80852 CATGAAGTTTCTGAAAGTCG--AATTGGTTCCCC----TTCACAAATGCCGGAAGGCTCA 80905
| || || |||| |||||| | | || | || | || | || || ||
Sbjct 13419 CGTGCAGCTTCTTGAAGTCGTAGACAGCATCTTCGTAGTTGATGAAAGAGGGCAGAGACA 13360
Query 80906 GGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGC 80965
||| || || ||||| || || ||||| |||| | | |||| | || || ||||
Sbjct 13359 AGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGC 13300
Query 80966 ACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGC 81023
||| || || ||| || ||||| ||||| || ||||| |||| ||||||
Sbjct 13299 ACAGGTTGGA--GCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTG 13242
Query 81024 GTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCA 81083
||||||||| |||| | ||| | || ||||| ||| | || ||| ||||| | |||
Sbjct 13241 ATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCA 13182
Query 81084 AATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGC 81143
|| || | ||||||| |||||| || || || | | ||||| ||||
Sbjct 13181 AAGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAG 13122
Query 81144 TTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202
| ||||||| |||||| | || |||| || | ||||||||||| |||||||| |
Sbjct 13121 AGCCTCGAACTCATCACCGTAGCAG-TCAGCAAGACCAGGGCACTCGTTGGGGCACATAA 13063
Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262
| ||| ||| | ||||| ||| ||||||||| ||||||||||| |||||
Sbjct 13062 GAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCA 13003
Query 81263 TGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320
||||||||| || |||||| ||||||| | ||| ||||| || | || || ||
Sbjct 13002 GGAACAGGTCACG--AGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945
Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGCG 81374
|| | || || || ||||| ||||| || || | |||| | || | ||||
Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTG-- 12887
Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434
||||||||||| ||||||||| ||||| ||| || ||||||| ||| || | ||
Sbjct 12886 -TTGCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAC 12828
Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGA- 81493
||| | || ||| || || || | || || || |||| || | | ||
Sbjct 12827 ACCGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGAC 12768
Query 81494 TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553
| ||| || || ||||| | | ||| |||||| ||||| || | ||| || |
Sbjct 12767 GTTCAAG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGT 12709
Query 81554 AAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGC 81613
| || || |||||||| || | ||||| |||| | ||| || |||| ||||||
Sbjct 12708 AGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCT 12649
Query 81614 TTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCA 81673
| || || ||||| ||||| |||| || ||| |||| | | | ||||| |
Sbjct 12648 GAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGA 12589
Query 81674 GGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCA 81733
||| || || ||| ||| ||| ||||| ||||| ||||| | ||| |||||||
Sbjct 12588 GGTTGTATGTCTCCAAGACACGTTCGATATCATCACCCCAGATACCAACAGCAACACGCA 12529
Query 81734 TAAACATGT 81742
| | |||||
Sbjct 12528 TGATCATGT 12520
>seq391
Length=65998
Score = 203 bits (224), Expect = 4e-47
Identities = 183/230 (80%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || ||||||||||| || || |||||||| ||||| |
Sbjct 44672 ATGCAAATATTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCT 44613
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | ||| | || ||||||||||||||||| |||||||| ||||||
Sbjct 44612 GATACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 44553
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||| || || ||||| ||||| |||| || ||||| | ||||| ||
Sbjct 44552 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTCTCCGACTACAAC 44493
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| ||||||||||| || ||| | ||||| |||||||| ||
Sbjct 44492 ATCCAGAAGGAGTCCACTCTTCACCTGGTCCTCCGTCTCCGCGGTGGTCA 44443
Score = 203 bits (224), Expect = 4e-47
Identities = 181/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| || ||||||||||| || || |||||||| ||||| |
Sbjct 44900 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCT 44841
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | ||| | || ||||||||||||||||| |||||||| ||||||
Sbjct 44840 GATACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 44781
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||| || || ||||| || ||||| | || ||||| | ||||| ||
Sbjct 44780 CAGCGATTGATTTTCGCCGGCAAGCAGCTTGAGGACGGGCGCACCCTGTCTGACTACAAC 44721
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || |||||||| ||| | || |||||||||||
Sbjct 44720 ATTCAGAAGGAATCAACCCTTCATCTCGTCCTCCGCCTTCGCGGTGG 44674
>seq1088
Length=144876
Score = 179 bits (198), Expect = 4e-40
Identities = 180/231 (78%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| || || |||||||| ||||| || ||||| || || |||||||| |||||
Sbjct 60482 ATCATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 60541
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||||| || | ||| | || || |||||||||||||| ||||| || |||
Sbjct 60542 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 60601
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTA 27581
|||||||| || || |||||||||||||| |||||||||| || ||||| ||| |||||
Sbjct 60602 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTA 60660
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| |||||||| || || ||| | || || || |||||
Sbjct 60661 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCTCCGCCTCCGTGGTGG 60711
>seq933
Length=180792
Score = 129 bits (142), Expect = 7e-25
Identities = 209/297 (70%), Gaps = 4/297 (1%)
Strand=Plus/Plus
Query 31991 TCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACA 32050
||||||| || ||||||||||| ||||| ||| |||||| ||| || | ||||
Sbjct 57479 TCAAGCCCGGTCAACGCAAGGTGATCTACGCGTGCTTCAAGAGAAACTTGATCAAAGACA 57538
Query 32051 TGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGG 32110
|||||| | | || | || || ||| | || |||||||| || |||||||| ||
Sbjct 57539 AGAAGGTTGTTGAATTGGCAGGTTATGTGTCCGAACAAACGGCATACCACCACGGTGAAC 57598
Query 32111 CGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGA 32170
||| || || |||||| | ||||| |||||||| || ||| |||||||| | |
Sbjct 57599 AGTCACTTCAACAGACCATTATTGGTCTTGCCCAGAACTTCGTGGGTTCAAATAACATCA 57658
Query 32171 ACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGA 32230
||| || || || |||| | || || | || || || |||||| |||||||| |
Sbjct 57659 ACTGCCTGGAACCTAGTGGAAACTTCGGTTCTCGTCTTGCAGGTGGCTCTGATGCTGCCA 57718
Query 32231 GCTCCCGTTACATCTTCACCCG--TCTCGCACCTTCGACGCGCAAGATTTTCGACCC 32285
| | ||||||| |||||||| | |||| | |||| | ||||| || ||| ||||
Sbjct 57719 GTCCTCGTTACACGTTCACCCGATTGTCGC-CTTTCG-CCCGCAAAATCTTCCACCC 57773
>seq1221
Length=114529
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| || || |||||||| || || || ||||| ||||| || | |||
Sbjct 56272 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 56331
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| || || || ||||||||||| |
Sbjct 56332 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGATTG 56391
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || ||||| ||||| |||||||||| || ||||| | ||||| || |||| |||
Sbjct 56392 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 56451
Query 27595 G 27595
|
Sbjct 56452 G 56452
>seq700
Length=246488
Score = 100 bits (110), Expect = 3e-16
Identities = 146/206 (71%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGG---TCGTCGTTTGGTCAGCGT 64719
|| |||||||| ||||| || || ||||| | | || || |||| ||||||
Sbjct 27782 AAGAAGGCTGATTGGGCTATTCGATGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGT 27841
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| | || ||||| ||| || || || ||||| || | || ||| ||||||
Sbjct 27842 CTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTC 27901
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| || || ||||| |||||| | || || |||||||| ||||||||
Sbjct 27902 TGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGT 27961
Query 64840 GACGAGGGGCTCCACCAAGAATTTGC 64865
|||||||| || ||| || |||||
Sbjct 27962 GACGAGGGTCTTCACACCGACTTTGC 27987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570299093596320
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