Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq810 95.1 1e-14 >seq810 Length=454684 Score = 95.1 bits (104), Expect = 1e-14 Identities = 198/293 (68%), Gaps = 13/293 (4%) Strand=Plus/Plus Query 29758 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29817 ||| ||||| || |||| | | ||||||||||||||| | |||| | ||| ||| | Sbjct 151252 ATGGGGGTCATATCCCTTGACTGTGAAATCCTCTGCCTTCCATCCGTCAATGCT-TCCGC 151310 Query 29818 CCTCCTGTTTATCCT-CAGTGT-------GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 29869 ||| ||| || || | | ||| ||| || ||||| | ||| || ||| Sbjct 151311 CCT----TTTCTCGGGCAATTTCCAACTCGGGGAAGTTTCGCGGCTCGCGCTCAAGTTGA 151366 Query 29870 GTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAAC 29929 ||| || | || |||| ||| ||||| || ||||| || |||| | ||| || Sbjct 151367 ACCTTGAGAGCGTCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGGGTAAGG 151426 Query 29930 TCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCG 29989 || || | ||| | ||| || |||| ||||| || || || | ||||||||| Sbjct 151427 CTGCCAGGGACCAGCTCACAGACATGCGCCAACATGTGTGTTAGCAGCGCGTAGCTGGCA 151486 Query 29990 ATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 ||||| ||||| || ||||| ||||| || | || | |||||||||||||| Sbjct 151487 ATGTTGAAGGGAACACCGAGACCCATATCGCAGGATCGTTGGTAGAGCTGACA 151539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406302546273912