Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq700 96.9 4e-15
>seq700
Length=246488
Score = 96.9 bits (106), Expect = 4e-15
Identities = 256/391 (65%), Gaps = 0/391 (0%)
Strand=Plus/Minus
Query 23551 TCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA 23610
|| ||||| || || | || ||||| | || || || || | ||| || || | ||||
Sbjct 27948 TCGTTAGAGAAAGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCA 27889
Query 23611 AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAAT 23670
|| | ||| ||||| |||||||||||||| |||||||| |||||||| ||||
Sbjct 27888 AAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAG 27829
Query 23671 GTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA 23730
| | || | || |||||| | | ||||| ||||||| | | || |
Sbjct 27828 GAAGAGTTCTTGTCCTGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGA 27769
Query 23731 ATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCA 23790
|| || |||| || || ||||| ||||| | | || || | || || || |||
Sbjct 27768 ATGGTGTCAACGGCGTTGAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCA 27709
Query 23791 ATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAA 23850
|| || | | || |||| || || || || || || ||||| || || || ||
Sbjct 27708 ATGAGCAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAG 27649
Query 23851 CATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACA 23910
|||| ||| |||| | ||||| || |||| | | | | || ||||| |||
Sbjct 27648 CATCGAGCCTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACA 27589
Query 23911 ATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941
|||||||| || ||||||||||||||||
Sbjct 27588 ATACCATCGGAGGCGGCAAAGAAAGCAAGAA 27558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521477661500400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |