Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq700 96.9 4e-15 >seq700 Length=246488 Score = 96.9 bits (106), Expect = 4e-15 Identities = 256/391 (65%), Gaps = 0/391 (0%) Strand=Plus/Minus Query 23551 TCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA 23610 || ||||| || || | || ||||| | || || || || | ||| || || | |||| Sbjct 27948 TCGTTAGAGAAAGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCA 27889 Query 23611 AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAAT 23670 || | ||| ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct 27888 AAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAG 27829 Query 23671 GTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA 23730 | | || | || |||||| | | ||||| ||||||| | | || | Sbjct 27828 GAAGAGTTCTTGTCCTGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGA 27769 Query 23731 ATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCA 23790 || || |||| || || ||||| ||||| | | || || | || || || ||| Sbjct 27768 ATGGTGTCAACGGCGTTGAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCA 27709 Query 23791 ATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAA 23850 || || | | || |||| || || || || || || ||||| || || || || Sbjct 27708 ATGAGCAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAG 27649 Query 23851 CATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACA 23910 |||| ||| |||| | ||||| || |||| | | | | || ||||| ||| Sbjct 27648 CATCGAGCCTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACA 27589 Query 23911 ATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941 |||||||| || |||||||||||||||| Sbjct 27588 ATACCATCGGAGGCGGCAAAGAAAGCAAGAA 27558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521477661500400