Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq391 136 3e-27
seq1088 132 3e-26
seq1221 109 4e-19
>seq391
Length=65998
Score = 136 bits (150), Expect = 3e-27
Identities = 158/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||||||||| ||| |||||| ||||||||||| |||| ||| ||| | || ||
Sbjct 44464 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCG 44523
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || ||||| |||||||| || | ||| | || ||||| |||
Sbjct 44524 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 44583
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| || | || || ||||| | || || ||||
Sbjct 44584 ATCTTGGACTTGACATTGT--CGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTCT 44641
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||||||| ||||| ||||||||
Sbjct 44642 TGCCGGTGAGGGTCTTGACGAATATTTGCAT 44672
Score = 116 bits (128), Expect = 3e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| || ||||| || |||||||| || | || |||| |||| ||
Sbjct 44692 ACGAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCA 44751
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || ||||| |||||||| || | ||| | || ||||| |||
Sbjct 44752 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 44811
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| || | || || ||||| | || || ||||
Sbjct 44812 ATCTTGGACTTGACATTGT--CGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTCT 44869
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
| || ||||||||||| || |||||||||||| ||
Sbjct 44870 TGCCGGTGAGGGTCTTGACAAAGATTTGCATGGTG 44904
>seq1088
Length=144876
Score = 132 bits (146), Expect = 3e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| |||||| ||||||||||| ||| || ||| | || ||
Sbjct 60693 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60634
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | |||||||| || | || | || ||||| |||
Sbjct 60633 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60574
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || |||||||| | || ||||||||
Sbjct 60573 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 60514
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||| |||||||| ||||| || |||||||||
Sbjct 60513 CCCGTAAGGGTCTTGACGAAAATCTGCATGATG 60481
>seq1221
Length=114529
Score = 109 bits (120), Expect = 4e-19
Identities = 135/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| ||| || | || || |||||||| || || ||||
Sbjct 56452 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 56393
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
|||| |||||||| || | || | || ||||| ||| ||||| ||| || |||
Sbjct 56392 TCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 56333
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || || ||||| ||||| |||||||||||
Sbjct 56332 --CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 56275
Query 44326 GAA 44328
|||
Sbjct 56274 GAA 56272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359983441610562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |