Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq118 266 3e-66 seq225 147 2e-30 seq143 132 5e-26 seq89 114 1e-20 >seq118 Length=2030615 Score = 266 bits (294), Expect = 3e-66 Identities = 551/809 (68%), Gaps = 16/809 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||| | |||||| | |||||| Sbjct 1883981 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTG 1883922 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| ||| | | | |||| ||| || Sbjct 1883921 TCCAAGGATCTCCA-CGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTC 1883863 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || || || ||||| ||| || || || ||||||||||| || |||||||| Sbjct 1883862 TCACATTCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 1883803 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | ||||| ||| | ||||||| || || ||||||||||| |||||| || Sbjct 1883802 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 1883743 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927 ||||||| | ||||| || | || || |||||||||||| ||| | | || || Sbjct 1883742 GGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGC-CTG 1883684 Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 | | | ||| | | | || |||||||| ||||| || || ||| || | |||||| Sbjct 1883683 CCCA-GCGAACGTAC--CTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGG 1883627 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 | || ||||| | || |||||| | | || || |||| | | |||| ||||| | Sbjct 1883626 CTGACTGGGCCATCCGATGGATCCAAGATAAGGACTCCTCCTTTGCCCAGCGTCTGGTTG 1883567 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | ||||| || || ||||| ||||||| || ||||| | || || ||||||| Sbjct 1883566 CTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCTTCTATTTTCTGGCTCA 1883507 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || |||||||| || ||||| ||| |||||||||||||| | ||||||| Sbjct 1883506 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGG 1883447 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 |||| || ||||||||||| | || | || | | || | ||| | Sbjct 1883446 GTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTCAAGGGCCGTGCCAGCAAGC 1883387 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 | || || ||| |||| || || ||| |||| || ||| |||||||| || | Sbjct 1883386 AGATGATCCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGG 1883327 Query 117288 CGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 | | | || |||| || || || | || | || ||| ||| ||||| |||||| Sbjct 1883326 CCCTTCCCTGTGC-CCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTC 1883268 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 ||||| || | || ||| ||| || | | || ||| |||||| | ||||||| Sbjct 1883267 GTCGCTGATCGTCTCCTGGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCC 1883208 Query 117407 CTGGACTTTATGAACCTCATCT-CCTTGG 117434 | ||||| ||| | ||||| |||||| Sbjct 1883207 TTCGACTTCATGGAAAACATCTCCCTTGG 1883179 >seq225 Length=1293757 Score = 147 bits (162), Expect = 2e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || |||||||| || || |||||| | || || || | Sbjct 459046 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 459105 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||||||| | || Sbjct 459106 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 459164 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||||| || ||||| ||||| || || | |||||||| | |||||| Sbjct 459165 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 459224 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 459225 CAACATCCAGAAGGAGTCCACCCTCCACCTGGT 459257 >seq143 Length=3159380 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| || || | || Sbjct 2350283 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 2350342 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| |||||||||||| | ||||| Sbjct 2350343 GACACTATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 2350401 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | || | || ||||| ||||| || |||| ||||| ||| || ||||| Sbjct 2350402 GCAACGCTTGATTTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 2350461 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| |||| || ||||| || Sbjct 2350462 CATTCAGAAGGAGTCCACTCTTCATCTTGT 2350491 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||||||| | || || || | | Sbjct 2351021 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 2351080 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| || || ||||| |||||| | || || Sbjct 2351081 GACACTATCGACAACG-TGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCA 2351139 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||| |||| || | |||||| | | ||||||||| Sbjct 2351140 GCAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAA 2351199 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 2351200 CATCCAGAAGGAGTCAACTCTCCACCTCGT 2351229 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 ||| |||| || || ||||| ||||| |||||||| | || ||||| | | || | | Sbjct 2350571 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCTGATACC 2350630 Query 40756 GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815 | | | | ||| || || | ||||| ||||| |||||| | |||||||| || Sbjct 2350631 ATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGT 2350690 Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 || || | || ||||| || ||||| |||| || ||||| |||||||||||||||| Sbjct 2350691 CTGATTTTTGCTGGCAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCCAG 2350750 Query 40876 AAGGAGGCCACGCTGCATCTAGT 40898 ||||| | || || ||||| || Sbjct 2350751 AAGGAATCTACCCTTCATCTCGT 2350773 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || |||||||| | || ||||| | || Sbjct 2350793 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTGGAAGTCGAGTCATCC 2350852 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| ||||| || || ||||||| Sbjct 2350853 GACACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 2350912 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| || ||||| || || || || | || || || |||||||||| Sbjct 2350913 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGTCGAACTCTTTCCGACTACAAC 2350972 Query 40870 ATCCAGAAGGA 40880 || |||||||| Sbjct 2350973 ATTCAGAAGGA 2350983 >seq89 Length=2234088 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 1543742 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 1543801 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || ||| ||||||| || ||||| Sbjct 1543802 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAACAGCGACTG 1543861 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || || || || || | || || ||| ||||||||||||||||||| Sbjct 1543862 ATCTTCGCTGGTAAGCAACTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 1543921 Query 40879 G 40879 | Sbjct 1543922 G 1543922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217564179040