Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq118 122 1e-22 >seq118 Length=2030615 Score = 122 bits (134), Expect = 1e-22 Identities = 550/860 (64%), Gaps = 30/860 (3%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| || | ||||| || ||||| || || || || || | | || || ||| Sbjct 1883134 TTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTT 1883193 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAA-AT 33409 |||||||| || || || ||||| | ||||| | || | | |||| || | Sbjct 1883194 TCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGT-TGCCAAGAGCGACCAG 1883252 Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAG 33469 | | ||| |||||||| || || || ||||| | ||| | ||||| || | ||| Sbjct 1883253 GAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAG 1883312 Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 | ||||| ||| |||| || || || |||||||||| || |||| || || || Sbjct 1883313 GGCACAGGGAAGGGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGAT 1883372 Query 33530 AA-----ATCTAACGGTTTCTTCACTCGG---TGGATGTAATAAATGTTTAAACATCAAA 33581 | ||| | | | || | | ||| | || || | | | | | Sbjct 1883373 ATCTTGGATC-ATCTGCTTGCTGGCACGGCCCTTGAGGTGAGAGTGG-------AGGAGG 1883424 Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || || ||| ||||||||||| | | || | |||||||| || || || Sbjct 1883425 CAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGA 1883484 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| || |||||||| || ||||| || || |||||||| | || |||||| Sbjct 1883485 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAAG 1883544 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758 || || || || ||||| || |||| || | || || | || | | || || Sbjct 1883545 ATACCCTCAACAGCAGCGAAAGCAACCAGACGCTGGGCAAAGGAGGAGTCCTTATCTTGG 1883604 Query 33759 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | || ||||| || ||||||||| | || || || || || ||||| || Sbjct 1883605 ATCCATCGGATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTT 1883663 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||||| || || | | || || | || || ||||| | || || | Sbjct 1883664 GAAGAGGTACGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGT 1883723 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 || || |||||||| || || ||||| || ||||||||||| | |||||||| || Sbjct 1883724 CTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGAT 1883783 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 ||| || || || ||||| || | | || || || || || |||||| ||| || Sbjct 1883784 CTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGC 1883843 Query 33998 AAAAAACGCCAATACATGTTTTATA--AAATATTTTTCGTCTGGTGTTA---GTTTATTC 34052 || || | ||| | |||| | | || | | || || | || | | || ||| Sbjct 1883844 GAAGAAAG-CAAGA-ATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTC 1883901 Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112 || || | || ||| || || | || | || || | ||||| || || ||||| ||| Sbjct 1883902 CAGTCGTGGAGATCCTTGGACAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCC 1883961 Query 34113 TTTTTATACATATTCCAGAT 34132 || || ||||| | ||| || Sbjct 1883962 TTCTTGTACATTTGCCAAAT 1883981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815600329120