Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq143 123 6e-23 >seq143 Length=3159380 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | |||||||| ||||| || || ||||| | || |||| |||||| Sbjct 2350776 AGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCT 2350717 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| || ||||||||||| || | ||| || ||||| || || || || || ||| Sbjct 2350716 TCCAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 2350657 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| | || ||||| || | |||||| | || ||||| || || || ||| Sbjct 2350656 TGGATCTTCGACTTAACATTGTCGATGGTATCAGACGACTCGACCTCAAGAGTGATGGTC 2350597 Query 104528 TTACCAGTAAGTGTTTTTACAAATAT 104553 || ||||| || || || || | ||| Sbjct 2350596 TTGCCAGTGAGGGTCTTGACGACTAT 2350571 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| || || ||||| ||||| | ||||| Sbjct 2350494 AGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCC 2350435 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || |||||||| | | || || || || || || || || || ||| Sbjct 2350434 TCAAGCTGCTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 2350375 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || || || || | || ||| || || ||||| || || || ||| Sbjct 2350374 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 2350315 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 2350314 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2350283 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || | ||| ||||| | || || ||| Sbjct 2351217 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGCTTACCA 2351158 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| |||||||| || || || || |||||||||||| ||||| || Sbjct 2351157 GCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTATCCTGAATC-TTGCTCTT 2351099 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || |||| || ||||| || || || ||||| ||||| || || Sbjct 2351098 CACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGT 2351039 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 2351038 CTTCACGAAAATCTGCAT 2351021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151394652917832