Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq143 98.7 9e-16 >seq143 Length=3159380 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | |||||||||||| || | ||| || ||| | || ||| || |||| Sbjct 2351002 CACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGG--AAAGAGTTCGACCATCC 2350945 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || || || || || ||||||| | || || || || ||||||||||| || ||||| Sbjct 2350944 TCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 2350885 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || ||| || | | ||||| | ||||| || | |||||||| Sbjct 2350884 TGGATCTTGCTCTTCACATTATCAATGGTGTCGGATGACTCGACTTCCAGAGTGATGGTC 2350825 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| || || || ||||| ||||| Sbjct 2350824 TTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| || | ||| || ||||| || | ||| ||||| | |||| | ||||| | Sbjct 2350490 CAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAA 2350431 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || ||| |||| || || | |||||| || || || || || || ||||| | || Sbjct 2350430 GCTGCTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 2350371 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || | ||||||| | ||| |||||| | || || || | |||||||| || | Sbjct 2350370 TCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGC 2350311 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCATG 95008 | || || || || || |||||||||||| Sbjct 2350310 CGGTCAGGGTCTTGACGAAGATCTGCATG 2350282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289776675440