Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq118 120 4e-22 >seq118 Length=2030615 Score = 120 bits (132), Expect = 4e-22 Identities = 548/857 (64%), Gaps = 24/857 (3%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || | ||||| || ||||| || || || || || | | || || ||| Sbjct 1883134 TTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTT 1883193 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA-AT 33131 |||||||| || || || ||||| | || || | || | | |||| || | Sbjct 1883194 TCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGT-TGCCAAGAGCGACCAG 1883252 Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191 | | ||| |||||||| || || || ||||| | ||| | ||||| || | || Sbjct 1883253 GAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAG 1883312 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 | ||||| ||| |||| || || || |||||||||| || ||||| || || || Sbjct 1883313 GGCACAGGGAAGGGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGAT 1883372 Query 33252 A-----GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACAT 33306 | |||| | | | || | | ||| || | | || | | || Sbjct 1883373 ATCTTGGATC-ATCTGCTTGCTGGCACGGCCCTTGAGGTGAGAGTGGAGG----AGGCAG 1883427 Query 33307 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 33366 || || || ||| ||||||||||| | | || || ||||| || || || || || Sbjct 1883428 GCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCA 1883487 Query 33367 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATT 33426 ||||| || |||||||| || ||||| || || |||||||| | ||| |||||||| Sbjct 1883488 GGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAAGATA 1883547 Query 33427 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATC 33483 || || || ||||| || |||| || | || || | || | | || || ||| Sbjct 1883548 CCCTCAACAGCAGCGAAAGCAACCAGACGCTGGGCAAAGGAGGAGTCCTTATCTTGGATC 1883607 Query 33484 CA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 || | || ||||| || ||||||||| | || || || || || ||||| || || Sbjct 1883608 CATCGGATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAA 1883666 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 ||| || || | | || || | || || ||||| | || || | || Sbjct 1883667 GAGGTACGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTC 1883726 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33662 || |||||||| || || ||||| || ||||||||||| | |||||||| ||||| Sbjct 1883727 GGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTG 1883786 Query 33663 TACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 33722 || || || ||||| || | | || || || || || || ||| ||| || || Sbjct 1883787 GACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAA 1883846 Query 33723 AAACGCCAATACATGTTTTATA--AAATATTTTTCGTCTGGTGTTA---GTTTATTCCAA 33777 || | ||| | |||| | | || | | || || | || | | || ||||| Sbjct 1883847 GAAAG-CAAGA-ATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAG 1883904 Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837 || | || ||| || || | || | || || | ||||| || || ||||| ||||| Sbjct 1883905 TCGTGGAGATCCTTGGACAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTC 1883964 Query 33838 TTATACATGTTCCAGAT 33854 || ||||| | ||| || Sbjct 1883965 TTGTACATTTGCCAAAT 1883981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945222142640