Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq143 116 3e-21 >seq143 Length=3159380 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || || ||||||| | ||||| ||||| || Sbjct 2350793 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTGGAAGTCGAGTCATCC 2350852 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| || || ||||| || |||||| Sbjct 2350853 GACACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 2350912 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| ||| | || |||| ||| ||| | ||| ||||| Sbjct 2350913 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGTCGAACTCTTTCCGACTACAAC 2350972 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || ||||| || || || || ||||| Sbjct 2350973 ATTCAGAAGGAATCTACTCTCCACTTGGTGCT 2351004 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||| || ||||||| |||| || ||||| || Sbjct 2350283 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 2350342 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || || || || ||||| Sbjct 2350343 GACACTATCGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCCCCCGACCA 2350401 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | |||||||||||||| || | || || | |||||| | |||||||| Sbjct 2350402 GCAACGCTTGATTTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 2350461 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || ||| | || || Sbjct 2350462 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 2350494 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 25005 ATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACT 25064 ||| | || ||||| | || || || ||||||| | || || ||||||||||| || Sbjct 2350571 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCTGATACC 2350630 Query 25065 ATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGC 25122 ||||| || || ||| || ||| ||||| || || || || |||||||| |||| Sbjct 2350631 ATCGA--CAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGC 2350688 Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182 | | |||||||| ||||| ||| | ||||| | || || | | ||| ||||| || | Sbjct 2350689 GTCTGATTTTTGCTGGCAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCC 2350748 Query 25183 AAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| || || ||| | || || Sbjct 2350749 AGAAGGAATCTACCCTTCATCTCGTCCT 2350776 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || ||||||| | || || ||||| | Sbjct 2351021 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 2351080 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| || || || || || || || || ||||| || Sbjct 2351081 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAG 2351140 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || || ||||||| |||||| || |||| ||||| Sbjct 2351141 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAAC 2351200 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 2351201 ATCCAGAAGGAGTCAACTCTCCA 2351223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326658579010