Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq118 143 3e-29 >seq118 Length=2030615 Score = 143 bits (158), Expect = 3e-29 Identities = 367/558 (66%), Gaps = 3/558 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||| ||||| || || || | ||| || ||| || | Sbjct 1883424 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAG 1883483 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || ||||| || |||| || || Sbjct 1883484 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAA 1883543 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || || | ||| | |||||| | | ||| Sbjct 1883544 GATACCCTCAACAGCAGCGAAAGCAACCAGACGCTGGGCAAAGGAGGAGTCCTTATCTTG 1883603 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||||| | ||||| || || || || || || || | || || || ||||| Sbjct 1883604 GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTT 1883663 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || ||||| ||||| | | | || ||||| || ||||| | || || || | Sbjct 1883664 GAAGAGGTACGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGT 1883723 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || || || | |||||||| || ||||| ||||||||||| | ||| || | ||| Sbjct 1883724 CTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGAT 1883783 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 ||| || || | |||| ||| ||||| || || ||||| |||||||| || || || Sbjct 1883784 CTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGC 1883843 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCA 93567 || ||||| | || || | || | |||||| | | | | || | ||| Sbjct 1883844 GAAGAAAGCAAGAATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCA 1883903 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 ||| ||||| || || || || | || || ||||||| || || || || || || Sbjct 1883904 GTCGTGGAGATCCTTGGACAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTT 1883963 Query 93628 TTTGTACATATCCCATAT 93645 |||||||| | ||| || Sbjct 1883964 CTTGTACATTTGCCAAAT 1883981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859031966960