Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq118 122 2e-22 seq129 113 9e-20 seq143 93.3 9e-14 seq101 86.0 1e-11 >seq118 Length=2030615 Score = 122 bits (134), Expect = 2e-22 Identities = 294/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||||||||||||||||| ||| Sbjct 1883158 TCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTG 1883217 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| | |||||| || || | || || || || || ||||| | Sbjct 1883218 GCCTTGTAGACCTTCTCGTTGCCAAGAGCGACCAGGAGACGATCAGCGACGAACTCAATG 1883277 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || |||||||||||||| | | ||| |||| |||||| || | Sbjct 1883278 TACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCACAGGGAAGGGCCTCAGTGAGG 1883337 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798 || |||| ||| ||| || || || | || | | ||| ||| | | | | Sbjct 1883338 AACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTGGATCATCTGCTTGCTGGCA 1883397 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | || || || | |||| ||||| | |||| | ||| ||||||||||| Sbjct 1883398 CGGC----CCTTGAGGTGAGAGTGGAGGAGGCAGGCAAAGTCAGTGTGAAGACCCTCGTC 1883453 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||||| |||||| || | ||| |||||||| | ||||| ||| ||||||| Sbjct 1883454 ACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCA 1883513 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 ||| || | |||| ||| ||| | | |||||| ||| | | ||||| || Sbjct 1883514 GAAAATAGAAGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCGAAAGCAACCAG 1883573 Query 251979 GCGCTCAGCAAACGACTTGTCCT 252001 |||| ||||| || ||||| Sbjct 1883574 ACGCTGGGCAAAGGAGGAGTCCT 1883596 >seq129 Length=1350799 Score = 113 bits (124), Expect = 9e-20 Identities = 162/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || ||||| ||||| || || || |||| |||||||| || ||| Sbjct 124848 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 124789 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| |||||||||| | || |||||||| |||||||||||| | Sbjct 124788 CAGACTCATCTCCGTCTCAAGCGTGGTCAGCGTTATGGTCTTTGCGGTCCCAATGGTTCC 124729 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| |||| ||| | || || || ||||| ||| Sbjct 124728 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTTGAGGGTTTCCCTAA-GCA 124670 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCT 279569 ||||| | ||| || | || ||||||||| | |||||| || Sbjct 124669 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTTGACTCCGCT 124624 Score = 107 bits (118), Expect = 4e-18 Identities = 455/708 (64%), Gaps = 47/708 (7%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || || |||||||||||||||||||| || || || ||| | | | | ||||| Sbjct 124485 CTTTCTGGTGGTTGGAAGATGAAGCTCGCTCTGTGCCGTGCCGTCTTCGAGGCTCCCGAT 124426 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || || ||||| ||||| |||||||| |||| | ||||| ||||| | | Sbjct 124425 ATTCTGCTTCTTGACGAGCCTACCAACCATTTGGATGTGAAGAACGTTAAGTGGCTCGAG 124366 Query 279825 TCCTACCTAACCAG-TCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTT 279883 ||||| | || ||| || ||||| |||| |||||||||||||||||||| Sbjct 124365 GAGTACCTCATCAACTCTCCT---TGCA-CTTCCATCATCGTCTCTCACGACTCTGGCTT 124310 Query 279884 CCTAGATGCCGTGTGCTCTGC-CATCATTCACTATGAGCAA---AATCTGAAGCTCTCCA 279939 ||| || ||| ||| | || |||| | ||||| |||| || || |||| || || Sbjct 124309 CCTCGACAACGTCTGC-CAGCACATCGTCCACTACGAGCGCTTCAAGCTCAAGCGCTACA 124251 Query 279940 AGCACATCGGCAACCTGTCTGCTTTCGTGGCA---AAGCGCCCTG---AGGCGGCCGCCT 279993 || ||||||||| |||| ||||| || || | | ||| || || | Sbjct 124250 AG------GGCAACCTGGCTGCCTTCGTCGCCCGCAACCCCTCTGCCAAGTCG------T 124203 Query 279994 ACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGG 280053 |||| || || || || ||| ||||||||||| || || || |||| Sbjct 124202 ACTACGAGCTTGGTGAATCCGAGATGGAGTTCACTTTCCCTGAGCCCGGTTTCCTCGAGG 124143 Query 280054 GCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTC------TCCTTTGCTT 280107 | ||| | |||| || || ||||||| | | ||||| | Sbjct 124142 GTGTCAAGACCAAGGCCAAGGCCATT------CTCCGTGCCACCAACATGTCCTTCCAGT 124089 Query 280108 ATCCCAATGGCCCCAA----CATCTTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCA 280163 | || | | |||| || ||||| | || || ||| ||| || ||| Sbjct 124088 ACCCTGGTACCTCCAAGCCTCAGATTCAGGACA-TCTCCTTCCAGTGCTCTCTGGGCTCC 124030 Query 280164 CGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACT 280223 || |||| ||||| || ||||| ||||| || |||||||| || ||||| || || ||| Sbjct 124029 CGTATTGCCGTCATCGGTCCCAACGGTGCTGGCAAGTCTACTCTGATCAACGTGCTCACT 123970 Query 280224 GGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTAC 280283 || ||| | ||||| |||| | | |||| ||||| || || || ||| Sbjct 123969 GGTGAGCTCATCCCCACTCAGGGTGAGATCTACCAGCACGAGAACATCCGTATCGCCTAC 123910 Query 280284 GTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATAC 280343 | |||||||||||| |||||||| |||||||| |||| ||||||| | | ||| Sbjct 123909 ATTAAGCAGCACGCTTTCGCTCACATCGATAACCACCTTGACAAGACTCCTTCCGAGTAC 123850 Query 280344 ATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||||| ||||| | | || | ||| |||||| ||| | |||| || Sbjct 123849 ATTCAATGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 123803 Score = 87.8 bits (96), Expect = 4e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| || ||||| || ||||||||||||| || ||||| ||||| | Sbjct 123476 CCAACTTTGGTCTCGATGCCGAGCTTGTTTCTCACTCTCGCATGCGTGGTCTGTCTGGTG 123417 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| |||| | | || ||||| ||||| | ||||| | ||||| Sbjct 123416 GTCAGCGTGTCAAGACTGTCCTTGCCGCTTGCTCT-TGGCAGCGACCTCATCTTATCGTC 123358 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||||||||||||||||| || || || Sbjct 123357 CTTGACGAGCCTACCAACTATCTCGATCGTGA 123326 >seq143 Length=3159380 Score = 93.3 bits (102), Expect = 9e-14 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| ||||| || || || |||||||||||||||||||| || | || || || || | Sbjct 1239967 AGTTGGTTCCCTTTCTGGAGGTTGGAAGATGAAGCTGGCTCTGGCCCGAGCTATGCTCCA 1239908 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814 ||||||||| || ||||| || || || || || ||||| | || ||||| | || Sbjct 1239907 GCGTGCCGACGTTCTACTTCTGGACGAACCTACTAACCATCTTGATGTTGCCAACATCGC 1239848 Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCAC 279872 ||||| | | |||||| | ||||| | || | | |||||||| |||||| Sbjct 1239847 TTGGCTCGAGAACTACCT--CAAGTCTCATCCCGATATCACCAGTCTCATTGTTTCTCAC 1239790 Query 279873 GACTCTGGCTTCCTAGA 279889 ||||| || ||||| || Sbjct 1239789 GACTCCGGATTCCTGGA 1239773 >seq101 Length=4191135 Score = 86.0 bits (94), Expect = 1e-11 Identities = 415/645 (64%), Gaps = 15/645 (2%) Strand=Plus/Minus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCAC-TGTCTTCATAG 293173 ||| | |||||| | |||||||| ||||||||||| | | | || || | | || Sbjct 2590492 CTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCG-CTGAG 2590434 Query 293174 AGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCT 293233 |||||||||| ||||| |||| ||||||||||| | | | ||| || |||| Sbjct 2590433 AGATCTCCCAAACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCT 2590374 Query 293234 GGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGA 293292 | || || || | ||||| || |||||||||| | |||||||| || |||| | Sbjct 2590373 GAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATG- 2590315 Query 293293 GCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGA 293352 | | || || || || | | ||||||||| ||||||||||||||||| || Sbjct 2590314 TCGACAAGGTCCTTGAGTAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGG 2590255 Query 293353 CGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCA 293412 || ||| || || || || ||| ||| ||| || |||||| | Sbjct 2590254 CGTTGGTAGATATTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAG 2590195 Query 293413 GTAGATGCGGTAGGCATAAGAGC-AGTCGTCAGAGAGTTCCTCACACCCT---TCTTGAC 293468 ||| || ||||||||| |||| || || ||| ||| | | || | ||||||| Sbjct 2590194 GTACTGGCAGTAGGCATAGGAGCAAGGAGT-AGACTGTTACGGATGCCGTGTGTCTTGAC 2590136 Query 293469 ACGCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGA-GGTGTAACACCCCAGAGATGA 293526 | | ||| | |||||| |||||| ||| || || | || ||| | | Sbjct 2590135 TTCCTCTCGAAGAGTCTCCCAGTCCCAGAG--GTCAGAGGGCTTGACGTTCCACATGTCG 2590078 Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 |||| | ||||||| ||| || || |||| ||||||| | ||| || | ||| Sbjct 2590077 AACTGGAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCC 2590018 Query 293587 TCAGAGAGCTCGCA-AGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACG 293645 | || |||| ||| || || | ||||| |||||| ||| ||||||| Sbjct 2590017 TTAGCCAGCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTT 2589959 Query 293646 GTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTG 293705 |||||||| ||||||| || || || ||||| ||| | ||| |||| Sbjct 2589958 GTTGAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGC 2589899 Query 293706 CAGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCT 293750 |||||||| ||||| | ||||| ||| || | ||| |||| || Sbjct 2589898 AAGACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACT 2589854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833455033614