Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06]
254 sequences; 46,292,722 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq143 168 1e-36
seq225 167 4e-36
seq89 138 2e-27
>seq143
Length=3159380
Score = 168 bits (186), Expect = 1e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | || | || || |||||||| || || ||||| ||||| |||
Sbjct 2350509 CCACCGCGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 2350450
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| ||||| || || | | ||| |||||||| ||
Sbjct 2350449 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGGGGG 2350390
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | ||||||| ||||| ||||| | || || ||
Sbjct 2350389 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACC 2350330
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| | ||||||||| || || || |||||||||||||| |||||||| |||
Sbjct 2350329 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATGATG 2350279
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| || || || || || || ||||| || |||||
Sbjct 2351019 CCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 2350960
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || || || ||||||| |||||||| || |||
Sbjct 2350959 AGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGAGGA 2350900
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||| || || |||||||| | ||| || |||
Sbjct 2350899 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTGTCGGATGACTCGACT 2350840
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||||| ||||| || |||||||||||||| || |||||
Sbjct 2350839 TCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793
Score = 111 bits (122), Expect = 3e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | || || || || || || |||||||| || ||||
Sbjct 2350791 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCA 2350732
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | ||||| || || || || || | || ||||| || ||
Sbjct 2350731 AGGGTTCGGCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGG 2350672
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||| || |||||||| || | || || ||
Sbjct 2350671 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCAGACGACTCGACC 2350612
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
|| | |||||||| || || |||||||||||||||| |||
Sbjct 2350611 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGACTAT 2350571
>seq225
Length=1293757
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| ||| || |||||||| || |||||||| || |||
Sbjct 459275 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 459216
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || ||||| | || ||||| || ||
Sbjct 459215 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCAGGGGGG 459156
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 459155 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 459096
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||||||||| ||||||||
Sbjct 459095 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 459049
>seq89
Length=2234088
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || |||||||| || | ||||| || | ||||| || ||||| ||
Sbjct 1543920 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 1543861
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|||| |||||||| || ||||| || |||||||| || ||||| | |||||| |||
Sbjct 1543860 AGTCGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1543801
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||| |||||||| |||||
Sbjct 1543800 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1543742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619473848880
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