Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq118 367 2e-96 seq101 304 2e-77 >seq118 Length=2030615 Score = 367 bits (406), Expect = 2e-96 Identities = 598/846 (71%), Gaps = 20/846 (2%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || ||| |||||| || ||||||||||||||| ||||||| Sbjct 1883972 ATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTGTCCAAGGAT 1883913 Query 42369 ACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423 || |||| | || ||| ||| | || |||| ||| || |||| | Sbjct 1883912 CTCCACGACTGGAA--CAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCTCACATTC 1883855 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | || |||||||| |||||||| || || ||||| |||||||| | | | |||| Sbjct 1883854 TTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTG 1883795 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 ||||| ||| | ||||| || || ||||||||||||||||| || |||||| Sbjct 1883794 GCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACA 1883735 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603 | ||||| ||| ||| || || || |||| |||||| ||| || | | |||| | Sbjct 1883734 TTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGCCTGCCCAGCG-A 1883676 Query 42604 ACGGGC-TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 ||| | | ||||| ||||| ||||| || ||||||||| |||||||| |||||||| Sbjct 1883675 ACGTACCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCC 1883616 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 || |||||| | | ||| | | || | | || | ||||| || || | || Sbjct 1883615 ATCCGATGGATCCAAGATAAGGACTCCTCCTTTGCCCAGCGTCTGGTTGCTTTCGCTGCT 1883556 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGT 42781 || ||||| ||||||||| || |||||||| || || |||||||||||| || ||| Sbjct 1883555 GTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCTTCTATTTTCTGGCTCAAGAAGCGTGGT 1883496 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || ||||| || || |||||||| ||||| |||||| | |||||||| || || | Sbjct 1883495 CTC-ATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACAC 1883437 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCGAAGGAGCGGG 42900 ||||||||||||||||| ||| |||||| ||| | ||| | ||| || | Sbjct 1883436 TGACTTTGCCTGCCTCCTCCACTC---TCACCTCAAGGGCCGTGCCAGC-AAGCAGATGA 1883381 Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960 ||| | |||||||| || ||||| || || ||||||||||||| || | || | Sbjct 1883380 TCCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCCCTTC 1883321 Query 42961 CC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 || ||| |||| ||||||||||| ||||||||| ||||||| ||| |||||| Sbjct 1883320 CCTGTG-CCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCT 1883262 Query 43020 GACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 || | |||||| || | ||| || | ||||||| | | ||||||||| Sbjct 1883261 GATCGTCTCCTGGTCGCTCTTGGCAACGAGAAG-GTCTACAAGGCCACCAACCCCTTCGA 1883203 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 ||| ||||| |||||||| | | |||||||||||||| ||||||||||| || ||||| Sbjct 1883202 CTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGA 1883143 Query 43139 CTACCA 43144 |||||| Sbjct 1883142 CTACCA 1883137 >seq101 Length=4191135 Score = 304 bits (336), Expect = 2e-77 Identities = 884/1343 (66%), Gaps = 41/1343 (3%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || ||||| ||||||| ||| | | || Sbjct 2590288 GTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTATAGGG 2590229 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| |||||||||| ||||| | || || ||||| ||||| || | | Sbjct 2590228 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAG 2590169 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA-TGCGGAGTCTGAGCTCGTTCCAGTCCC 244268 || |||||||| | | |||||| ||| || | | || |||| |||| | Sbjct 2590168 GAGTAGACTGTTACGGATGCCGTGTGTCTTGACTTC-----CT---CTCGAAG-AGTCTC 2590118 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 || ||| ||||||| | | |||| | ||||||||| ||||| || | |||| Sbjct 2590117 CCAGTCCC-AGAGGTCAGAGGGCTTGACGTTCCACATGTCGAACTGGAGAATACCCTCAG 2590059 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTC 244387 | ||||| |||| | |||| | ||||||||| || || ||||||| || | Sbjct 2590058 AGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGG 2589999 Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447 || ||| || |||| || |||||||| |||||| |||||| | || || |||| | Sbjct 2589998 CAGT-GAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCG 2589940 Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507 | | |||||| |||| || | ||| | ||||| || ||||| || || | Sbjct 2589939 GGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCAAGA 2589880 Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566 || ||||||| ||| ||| |||| | || | || | || || ||||| ||| | Sbjct 2589879 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG-ACAGGGTAGTGGTTCAC 2589821 Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAA 244625 ||||| | ||||| |||||||| | | || | ||| ||| | | |||| || | Sbjct 2589820 ATCGATGATTTTGTTCAGGTTGCGAATAA-CAACCTGACTGACCTTGTGCAGCTTCTTGA 2589762 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685 ||||||| | | | || ||| | || ||| | | | || | || Sbjct 2589761 AGTCGTA---GCAAGCCTCATCGTAGTTGATGA-----AGGAGGGCAGAGATAGAGA--- 2589713 Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745 ||| |||||||||||||| ||||| || | | ||||| || ||| || ||||| | Sbjct 2589712 -GGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 2589654 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 | || || |||||| || |||| || || || |||| ||||||||| |||| Sbjct 2589653 GATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCT 2589594 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 |||||||||||||||| |||||||| |||||| | || | | || ||| || | Sbjct 2589593 TGTAGAGCATGAAGGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 2589534 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | |||||||| |||| | ||| |||||||| | |||||| |||||| |||| Sbjct 2589533 TCTGAGCCTTGATCGTCTTTCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCT 2589474 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 ||||||| || || ||| | ||||| |||||| |||||||| | ||| Sbjct 2589473 CGAACTCCTCTCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAATGTCC 2589414 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | || ||| | | || | || |||||| || || |||||||| ||||| | || | Sbjct 2589413 AGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGAAAAA 2589354 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 |||| | || | ||| ||| || |||||| | || || | || || |||| Sbjct 2589353 GGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGA 2589294 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 | || |||||| ||||| | ||||| || | || ||||| ||||||||||| |||| Sbjct 2589293 CATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCT 2589234 Query 245166 GGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||| | ||| | ||||| |||||||| || || |||| || | ||||| Sbjct 2589233 GGTCGA-CATAC---CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTC 2589178 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACA 245279 || |||||||| || |||||| | ||| | | | | | | ||| || || Sbjct 2589177 GATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACAT--TCA 2589120 Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || || || ||||||||| | ||| ||| |||||| || || || | Sbjct 2589119 GACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTC 2589060 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 |||| || ||||| |||||| | | || ||||| || |||| |||||||| ||| Sbjct 2589059 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAACTGGGGCTGAGGGG 2589000 Query 245400 TGCACGAGTTGAACAGAGTGGGG 245422 | | | ||||| || |||||| Sbjct 2588999 TACCGGCATTGAAGAGCGTGGGG 2588977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336201723040