Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq143 132 1e-25 seq225 113 1e-19 seq118 100 7e-16 seq89 100 7e-16 >seq143 Length=3159380 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || ||| || ||||| || |||||||| Sbjct 2350791 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCA 2350732 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||| || || || || ||||||||||| || | ||| Sbjct 2350731 AGGGTTCGGCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGG 2350672 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||| ||| || || Sbjct 2350671 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCAGACGACTCGACC 2350612 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATAT 288467 || || ||||| ||||| || || || |||||||||| ||| Sbjct 2350611 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGACTAT 2350571 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || ||||||| ||| || || || || || || || | | Sbjct 2350509 CCACCGCGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 2350450 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || || |||| || || || ||| Sbjct 2350449 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGGGGG 2350390 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || | || ||||| || |||| ||| || || || Sbjct 2350389 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACC 2350330 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| ||||| |||||||| ||||||||||| |||||||| ||| Sbjct 2350329 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATGATG 2350279 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || ||||||| || || || || || || | ||| || || || || Sbjct 2350984 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAA 2350925 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGT 288400 ||| || |||||||| || || || || || |||||||| || ||| ||||| | Sbjct 2350924 GATGAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCACAT 2350866 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || || | ||| || || ||||| || ||||| ||||| || || || ||||||| Sbjct 2350865 TATCAATGGTGTCGGATGACTCGACTTCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTGA 2350806 Query 288461 CGAATATCTGCAT 288473 |||| || ||||| Sbjct 2350805 CGAAGATTTGCAT 2350793 >seq225 Length=1293757 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 459275 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 459216 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || | ||| Sbjct 459215 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCAGGGGGG 459156 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 459155 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 459096 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 459095 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 459049 >seq118 Length=2030615 Score = 100 bits (110), Expect = 7e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| | || |||||||| || || || || ||||| ||||||||| || | Sbjct 1883308 TCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTGG 1883249 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAA 269272 || || || | ||||| || ||||| | | || ||||||| ||| |||||| | Sbjct 1883248 TCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACA 1883189 Query 269273 TTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAA 269325 | || || | || ||||| ||||||||||| |||||||| |||||| ||| Sbjct 1883188 TCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAA 1883136 >seq89 Length=2234088 Score = 100 bits (110), Expect = 7e-16 Identities = 132/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| || || || || || | ||| || || ||||||||| Sbjct 1543920 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 1543861 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||| ||||| || || |||||||| || | || || || Sbjct 1543860 AGTCGCTGTTG---GTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1543804 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 1543803 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 1543744 Query 288463 AA 288464 || Sbjct 1543743 AA 1543742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650560962212