Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq118 105 1e-17 seq129 86.0 1e-11 >seq118 Length=2030615 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 |||||||||||||| |||||| |||||||| || ||||| || || || | | || Sbjct 1883306 GGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTGGTC 1883247 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || ||||| | ||||| || ||||| ||| |||||||| | ||| ||||| ||| Sbjct 1883246 GCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACATC 1883187 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 || ||| || || || ||||||||||| |||||||| Sbjct 1883186 TCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 1883149 >seq129 Length=1350799 Score = 86.0 bits (94), Expect = 1e-11 Identities = 170/249 (68%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 334107 TCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTC 334166 |||||| | | ||| | || ||| | ||| || ||||| || ||| | |||| || Sbjct 124601 TCAATGGTGGTCATCTCAGTATCAGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCTTG 124660 Query 334167 AAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGT 334225 | | || || |||| |||||| ||| ||| |||| || |||||||| ||||| Sbjct 124661 ACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGAGT 124719 Query 334226 TGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAA 334285 || || || | || || || || || ||||| || || | |||||||| ||| || Sbjct 124720 GGACTTTCCGGAACCATTGGGACCGCAAAGACCATAACGCTGACCACGCTTGAGACGGAG 124779 Query 334286 CCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAG 334345 | || | ||| |||||||| || |||| || || ||||| || ||| | || || Sbjct 124780 ATGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAAG 124839 Query 334346 ATCCTCACC 334354 ||||||||| Sbjct 124840 ATCCTCACC 124848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876410814900