Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq225 107 2e-18 seq143 98.7 1e-15 seq89 89.7 5e-13 seq118 87.8 2e-12 >seq225 Length=1293757 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || || || | | Sbjct 459242 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 459183 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || || ||||| ||| || || | Sbjct 459182 AAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 459123 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | ||| || || || || || || Sbjct 459122 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 459063 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 459062 ACGAAAATCTGCAT 459049 >seq143 Length=3159380 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||| | ||| || ||||| ||||| || || | | Sbjct 2350986 GATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCA 2350927 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||||||||| ||||| || ||||| ||| || || | Sbjct 2350926 AAGATGAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACA 2350867 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||| || || | || | || || ||||| || || || Sbjct 2350866 TTATCAATGGTGTCGGATGACTCGACTTCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTG 2350807 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 2350806 ACGAAGATTTGCAT 2350793 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||||||| || || || || | || ||||| | Sbjct 2351216 TTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGCTTACCAG 2351157 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| |||||||| || || || || ||||| || || || ||| | || | || Sbjct 2351156 CGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTATC-CTGAATCTTGCTCTTC 2351098 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | ||||| | ||||| ||||| | || | || || ||||| ||||| Sbjct 2351097 ACGTTG-TCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGT 2351039 Query 138597 TTTTACAAAAATCTGCAT 138614 || || ||||||||||| Sbjct 2351038 CTTCACGAAAATCTGCAT 2351021 >seq89 Length=2234088 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| | ||| || ||||||||||| ||||| | ||| Sbjct 1543922 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 1543863 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || |||||||||||||| || || || || ||||| ||| || || | |||| Sbjct 1543862 TCAGTCGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 1543804 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||| | ||||| ||||||| || | || || || ||||| || || || Sbjct 1543803 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 1543744 Query 138604 AAA 138606 ||| Sbjct 1543743 AAA 1543741 >seq118 Length=2030615 Score = 87.8 bits (96), Expect = 2e-12 Identities = 241/365 (66%), Gaps = 21/365 (6%) Strand=Plus/Minus Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 ||||| || ||||| ||| |||||| | || || || ||||| || || ||||| ||| Sbjct 1883492 ATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGAC 1883433 Query 52542 TTTGCGTGCCTCT---ACT---ACAAGACGCGC-GTGACCGAAAAATTGGATTCGGACAC 52594 ||||| |||||| ||| || | | || ||| | | || | | | Sbjct 1883432 TTTGCCTGCCTCCTCCACTCTCACCTCAAGGGCCGTGCCAGCAA----------GCAGAT 1883383 Query 52595 GATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCT 52654 ||||| || ||| || || || | || ||| ||||||| | || | || || Sbjct 1883382 GATCCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCCCT 1883323 Query 52655 GCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGC 52714 || | || || ||||||||| | | |||| ||||||| ||||| || || Sbjct 1883322 TCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGC 1883263 Query 52715 GGATCGTCTGTTGGTGCAGCTCG-GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTT 52772 |||||||| |||| |||| |||| | | ||| || ||| || ||| || || Sbjct 1883262 TGATCGTCTCCTGGTC--GCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTC 1883205 Query 52773 GAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGC 52832 || || ||| | ||||| || |||| |||||||||||||| ||||||||||| || | | Sbjct 1883204 GACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCC 1883145 Query 52833 GAGTA 52837 || || Sbjct 1883144 GACTA 1883140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260824366880