Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq143 134 2e-26 seq225 120 3e-22 seq89 102 9e-17 >seq143 Length=3159380 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || || |||||||| |||| || |||||||||||||| || Sbjct 2350474 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 2350415 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||||||| |||||||||| || | || |||||||||| ||||| ||||| ||| Sbjct 2350414 AATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 2350356 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| ||||| ||||| || || | Sbjct 2350355 TGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGA 2350296 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 2350295 CGAAGATCTGCAT 2350283 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||||||||| ||||| || | || || || |||||||| || || Sbjct 2350983 TCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAG 2350924 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||| ||||| | || | | |||||||||| |||||| |||| | | Sbjct 2350923 ATGAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTA 2350864 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || |||| |||||||| || || || || || || || Sbjct 2350863 TCAATGGTGTCGGATGACTCGACTTCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACG 2350804 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 2350803 AAGATTTGCAT 2350793 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| ||||| ||||| |||||||||| || || || |||| || Sbjct 2350773 ACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCC 2350714 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||| || || |||| ||||||||||| | || | | |||||||||| | Sbjct 2350713 AGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGG 2350654 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || || ||| || || || | |||||||| ||| Sbjct 2350653 ATCTTCGACTTAACATTGTCGATGGTATCAGACGACTCGACCTCAAGAGTGATGGTCTTG 2350594 Query 46565 CCCGTCAGCGTTTTAAC 46581 || || || || || || Sbjct 2350593 CCAGTGAGGGTCTTGAC 2350577 >seq225 Length=1293757 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || ||||| | || |||||||||||||| || || Sbjct 459240 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 459181 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 459180 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 459122 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| || | ||||| || || ||||| || || || | Sbjct 459121 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 459062 Query 46581 CAAAGATTTGCATTTTGC 46598 | || || ||||| |||| Sbjct 459061 CGAAAATCTGCATCTTGC 459044 >seq89 Length=2234088 Score = 102 bits (112), Expect = 9e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| ||||| || | || ||||| ||||| || ||||| | Sbjct 1543922 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 1543863 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||| ||||| | || | | |||||||||| |||||| ||||| | Sbjct 1543862 TCAGTCGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1543803 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| || || || || | |||||||| ||||||||||| || || || | Sbjct 1543802 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1543743 Query 46584 A 46584 | Sbjct 1543742 A 1543742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236605368080