Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq118 197 1e-45 seq225 122 9e-23 seq143 118 1e-21 seq89 114 1e-20 >seq118 Length=2030615 Score = 197 bits (218), Expect = 1e-45 Identities = 378/552 (68%), Gaps = 9/552 (2%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| |||||||| || | |||||||| | || ||||| ||||| ||| |||| Sbjct 1883424 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAG 1883483 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || |||||||| || || || |||||||| || || | ||||| || ||||| Sbjct 1883484 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAA 1883543 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGG 133072 || ||||| || || |||||||| ||||| |||| | | || | || || || || | Sbjct 1883544 GATACCCTCAACAGCAGCGAAAGCAACCAGACGCTGGGCAAAGGAGGAGTCCTTATCTTG 1883603 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132 |||||| || | ||||| || ||||| | | || ||| || || || || ||||||| Sbjct 1883604 -GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 1883662 Query 133133 TCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATA 133190 | || | | | ||| || ||| | | |||||||||||||||| || || Sbjct 1883663 TGAAGAG--GTACGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 1883720 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | || ||||| | ||||||||| ||| || |||||||| || || || |||||| Sbjct 1883721 GGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGG 1883780 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | ||| || || | ||| |||||||| || || |||||||| || || || ||| Sbjct 1883781 GATCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGC 1883840 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTC 133367 ||||| || || || | ||| || ||| |||| | | | ||| ||| | Sbjct 1883841 AGCGAAGAAAGCAAGAATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTT 1883900 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| | |||||||||||||| | |||||| | ||||| || || ||||| || Sbjct 1883901 CCAGTCGTGGAGATCCTTGGACAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGC 1883960 Query 133428 TTTTTTGTACAT 133439 || |||||||| Sbjct 1883961 CTTCTTGTACAT 1883972 >seq225 Length=1293757 Score = 122 bits (134), Expect = 9e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 459046 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 459105 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| | || Sbjct 459106 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 459164 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || ||||| ||||| || || | |||||||| | |||||| Sbjct 459165 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 459224 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| | || || || |||| || || Sbjct 459225 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCG 459263 >seq143 Length=3159380 Score = 118 bits (130), Expect = 1e-21 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || |||||||| | || |||||| | || Sbjct 2350793 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTGGAAGTCGAGTCATCC 2350852 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| ||||| ||||| | |||| Sbjct 2350853 GACACCATTGATAATG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACC 2350910 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | || ||||| || || || || | || || || |||||||| Sbjct 2350911 AACAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGTCGAACTCTTTCCGACTACA 2350970 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || |||||| | || || || |||||||| ||| Sbjct 2350971 ACATTCAGAAGGAATCTACTCTCCACTTGGTGCTCCGT 2351008 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309 ||| |||| || || ||||| ||||| |||||||| | || |||||| | | || | | Sbjct 2350571 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCTGATACC 2350630 Query 38310 GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | | |||| || |||| ||||| ||||| || ||| | ||||| ||||| Sbjct 2350631 ATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGT 2350690 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 || |||| || ||||| || ||||| |||| || ||||| ||||||||||||||| Sbjct 2350691 CTGATTTTTGCTGGCAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCCAG 2350750 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| | || || ||| | || || || Sbjct 2350751 AAGGAATCTACCCTTCATCTCGTCCTCCG 2350779 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||||||| | || || ||| | | Sbjct 2351021 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 2351080 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || || | || || ||||| || ||| | || | Sbjct 2351081 GACACTATCGACAACG--TGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATC 2351138 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| || || ||| |||| || | |||||| | | |||||||| Sbjct 2351139 AGCAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACA 2351198 Query 38422 ACATCCAAAAGGA 38434 ||||||| ||||| Sbjct 2351199 ACATCCAGAAGGA 2351211 >seq89 Length=2234088 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 1543742 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 1543801 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| |||||||||||| | ||||||||||| || Sbjct 1543802 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAACAGCGACTG 1543861 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || || || || | || || ||| ||||||||||||||| ||| Sbjct 1543862 ATCTTCGCTGGTAAGCAACTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 1543921 Query 38433 G 38433 | Sbjct 1543922 G 1543922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171211951360