Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06]
254 sequences; 46,292,722 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq118 197 1e-45
seq225 122 9e-23
seq143 118 1e-21
seq89 114 1e-20
>seq118
Length=2030615
Score = 197 bits (218), Expect = 1e-45
Identities = 378/552 (68%), Gaps = 9/552 (2%)
Strand=Plus/Plus
Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953
||| |||||||| || | |||||||| | || ||||| ||||| ||| ||||
Sbjct 1883424 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAG 1883483
Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013
|| |||||||| || || || |||||||| || || | ||||| || |||||
Sbjct 1883484 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAA 1883543
Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGG 133072
|| ||||| || || |||||||| ||||| |||| | | || | || || || || |
Sbjct 1883544 GATACCCTCAACAGCAGCGAAAGCAACCAGACGCTGGGCAAAGGAGGAGTCCTTATCTTG 1883603
Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132
|||||| || | ||||| || ||||| | | || ||| || || || || |||||||
Sbjct 1883604 -GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 1883662
Query 133133 TCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATA 133190
| || | | | ||| || ||| | | |||||||||||||||| || ||
Sbjct 1883663 TGAAGAG--GTACGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 1883720
Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250
| || ||||| | ||||||||| ||| || |||||||| || || || ||||||
Sbjct 1883721 GGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGG 1883780
Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310
| ||| || || | ||| |||||||| || || |||||||| || || || |||
Sbjct 1883781 GATCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGC 1883840
Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTC 133367
||||| || || || | ||| || ||| |||| | | | ||| ||| |
Sbjct 1883841 AGCGAAGAAAGCAAGAATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTT 1883900
Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
||||||| | |||||||||||||| | |||||| | ||||| || || ||||| ||
Sbjct 1883901 CCAGTCGTGGAGATCCTTGGACAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGC 1883960
Query 133428 TTTTTTGTACAT 133439
|| ||||||||
Sbjct 1883961 CTTCTTGTACAT 1883972
>seq225
Length=1293757
Score = 122 bits (134), Expect = 9e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || |||||||| || || |||||| | || || ||| |
Sbjct 459046 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 459105
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| ||||| ||||| || ||| | ||
Sbjct 459106 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 459164
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| ||||| | || ||||| ||||| || || | |||||||| | ||||||
Sbjct 459165 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 459224
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||||| | || || || |||| || ||
Sbjct 459225 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCG 459263
>seq143
Length=3159380
Score = 118 bits (130), Expect = 1e-21
Identities = 159/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || || || |||||||| | || |||||| | ||
Sbjct 2350793 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTGGAAGTCGAGTCATCC 2350852
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | || | | |||| || |||| ||||| ||||| ||||| | ||||
Sbjct 2350853 GACACCATTGATAATG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACC 2350910
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| ||||| | || ||||| || || || || | || || || ||||||||
Sbjct 2350911 AACAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGTCGAACTCTTTCCGACTACA 2350970
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||| || |||||| | || || || |||||||| |||
Sbjct 2350971 ACATTCAGAAGGAATCTACTCTCCACTTGGTGCTCCGT 2351008
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309
||| |||| || || ||||| ||||| |||||||| | || |||||| | | || | |
Sbjct 2350571 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCTGATACC 2350630
Query 38310 GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369
| | | |||| || |||| ||||| ||||| || ||| | ||||| |||||
Sbjct 2350631 ATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGT 2350690
Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429
|| |||| || ||||| || ||||| |||| || ||||| |||||||||||||||
Sbjct 2350691 CTGATTTTTGCTGGCAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCCAG 2350750
Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| | || || ||| | || || ||
Sbjct 2350751 AAGGAATCTACCCTTCATCTCGTCCTCCG 2350779
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||||||| | || || ||| | |
Sbjct 2351021 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 2351080
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| || || | || || ||||| || ||| | || |
Sbjct 2351081 GACACTATCGACAACG--TGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATC 2351138
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| || || ||| |||| || | |||||| | | ||||||||
Sbjct 2351139 AGCAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACA 2351198
Query 38422 ACATCCAAAAGGA 38434
||||||| |||||
Sbjct 2351199 ACATCCAGAAGGA 2351211
>seq89
Length=2234088
Score = 114 bits (126), Expect = 1e-20
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | |
Sbjct 1543742 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 1543801
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| |||||||||||| | ||||||||||| ||
Sbjct 1543802 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAACAGCGACTG 1543861
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| || || || || || || | || || ||| ||||||||||||||| |||
Sbjct 1543862 ATCTTCGCTGGTAAGCAACTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 1543921
Query 38433 G 38433
|
Sbjct 1543922 G 1543922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171211951360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |