Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq85 309 4e-79 seq145 89.7 7e-13 seq101 86.0 8e-12 >seq85 Length=4752789 Score = 309 bits (342), Expect = 4e-79 Identities = 989/1532 (65%), Gaps = 33/1532 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | | ||| ||||| || || || || Sbjct 2537267 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCAATCTCCTCCTTGGAC 2537326 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| |||||| | ||| || || | | |||| || | Sbjct 2537327 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCAACG 2537386 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 2537387 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTAACCTCAATCTGGGGAACA 2537446 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 2537447 CCACGGGGGGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTG 2537506 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||| | || || |||| || || || Sbjct 2537507 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 2537566 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||| | | ||||| | || || || || || | || |||| | |||| Sbjct 2537567 GTGGAGAAAACCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 2537626 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||| ||||| | || || ||| | |||| Sbjct 2537627 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCGACATC---GAGAAGCAGG 2537683 Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036 ||| | || || |||| |||| | | || ||||| ||||| Sbjct 2537684 ATCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCAGAGAGAATCGCGGCCTGGACG 2537737 Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096 | || ||||| || || |||||||||||||| || | || || | || || ||||| Sbjct 2537738 GCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 2537797 Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156 || || || | | | | || | ||||| || || ||||||||||| | || Sbjct 2537798 AAGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACA 2537857 Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216 || || | || || || |||||||| | ||| ||| ||||| || | Sbjct 2537858 ATCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGG 2537917 Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 ||| ||||| | ||| || || ||||| ||||| |||||||| || || || Sbjct 2537918 ATAGTGGATCGGAAAAGATCCTGGCAAAGCTCCTCGAAACGAGCACGGGTGATAGAGGTG 2537977 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 ||||| |||| || ||| | | || || || || || | || || || | ||||| Sbjct 2537978 TAGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCGATCGAGGTCTGAGCAGAGGAAGAA 2538037 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396 | |||||||| || ||||| || || ||||| | ||| || ||||| || ||| | Sbjct 2538038 AGTGTTCGCTTGGCACGCTCGCAAGCAGTTCGGAGACGTCGCAGGGCGCGGACGTTGGTG 2538097 Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 | || || || || || | || || || | |||||| | || | Sbjct 2538098 CTCAGGTCCTTTTTGTGCTTTCTCTTGAATTCGTTTACGAAGTGGTTGACCAGACGGTTG 2538157 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 2538158 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCC 2538217 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 2538218 TCCTCAATGGTAAGGAGAGACACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACG 2538277 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 2538278 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 2538337 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||| || ||| ||| || || || || | ||||| || || ||||| || Sbjct 2538338 TTGATAATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 2538397 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| ||||| Sbjct 2538398 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCGAGG 2538457 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | | Sbjct 2538458 TAGGACTCAGCGGTCTCACGCATCTTGGTGAGGATCATAGCAGAGATCTCCTCGGGGGTG 2538517 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 || || || || || || || || || || || |||| || || |||| | Sbjct 2538518 AAGGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTT----GC--CACCCTTG 2538571 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 || | ||| | | | | ||||||||| | || |||| ||| | ||||| Sbjct 2538572 TCGACGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGAACCTCAGCGTCGGCGAACTTG 2538631 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| | ||||| || || || || ||||| | |||||||| || ||||||| Sbjct 2538632 CGACCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGAGGGTTCATAGCGACTTGGTTC 2538691 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || || || || || ||||| || | || || || ||||| | || ||||| Sbjct 2538692 TTGGCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTA 2538748 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 ||||| || || |||||||| || || || || Sbjct 2538749 GTTCGGTTACCCTGGTCGTTGGCGATGATATC 2538780 >seq145 Length=2630515 Score = 89.7 bits (98), Expect = 7e-13 Identities = 167/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| || |||||||| Sbjct 937608 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATACC 937667 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | ||||| | | || ||||| || ||||||||||| || || | | || | Sbjct 937668 GTCATCAATAGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTAGACGATGA- 937726 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || || | || | | | |||| || |||||||| |||||||| || || || || || Sbjct 937727 -TTTGTCGC-TCACCGTCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 937784 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || || ||| ||| || || ||||| | | ||||| || || || ||||| Sbjct 937785 GTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTCG 937844 Query 7696 TTG 7698 || Sbjct 937845 CTG 937847 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 937906 CGTTGAAGTAGGCAGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 937965 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| | Sbjct 937966 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 938025 Query 7824 TC 7825 || Sbjct 938026 TC 938027 >seq101 Length=4191135 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 104707 TAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGAT 104766 |||||||||| ||||| || ||||| ||||||||||| || | ||||||||| || Sbjct 2590248 TAGATATTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTG 2590189 Query 104767 GCGGTAGGCATAGGTGCAAGAAGAAGACTATT 104798 || ||||||||||| ||||| || ||||| || Sbjct 2590188 GCAGTAGGCATAGGAGCAAGGAGTAGACTGTT 2590157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130783453360