Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq101 206 3e-48 seq118 122 1e-22 seq85 87.8 2e-12 >seq101 Length=4191135 Score = 206 bits (228), Expect = 3e-48 Identities = 540/809 (67%), Gaps = 21/809 (3%) Strand=Plus/Minus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | |||||| || || | ||||| || || || || | ||||||||||| Sbjct 2589676 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 2589617 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||| |||||| |||||||||||||||||| |||| | || ||||| ||||| | Sbjct 2589616 ACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCAGTCTGGGC 2589557 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGT--CCCTC 106683 || ||||| || | ||| | | || | | || | | | | || | || | ||| | Sbjct 2589556 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG---ATCGTCTTTCGACCCTTGCCCGC 2589500 Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743 | |||||||||| ||| || || || |||||||| || ||||| || || || Sbjct 2589499 CTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCAAGGCCAGG 2589440 Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803 || || || || | | | ||| | ||| || ||||| |||||||||||||| Sbjct 2589439 GCACTCGTTGGGGCACATCAATGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAG 2589380 Query 106804 GTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGG 106861 || || ||||| |||| | ||||| || || | ||| || |||| || | ||| ||| Sbjct 2589379 ATCAGGGATCCAAAGGGCAAGAAAA-AGGTCACGGGCACGGA-CCTCCTCCTTACCGTGG 2589322 Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921 || || | ||||||||||| | || ||| | |||||| ||||| || |||| || Sbjct 2589321 TTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 2589262 Query 106922 ATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 106978 | || || ||| ||| | || | ||||| || || ||| ||| || || Sbjct 2589261 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 2589202 Query 106979 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTAT 107036 |||||||| |||| || ||| | ||| ||| || || || ||| || ||| | Sbjct 2589201 CGAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAG--CCAG 2589144 Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096 | || | | | || | | || |||||||| |||||| ||| ||||| |||| Sbjct 2589143 TAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCAC 2589084 Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156 | | | ||||| | ||||| || | || ||| ||||| | | | | ||||| Sbjct 2589083 AGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGC 2589024 Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 || |||| ||| || || ||||| ||||||||||| || || | || || ||| Sbjct 2589023 AAGATGACAACTGGGGCTGAGGGGTACCGGCATTGAAGAGCGTGGGGGAAGCATGTGTGA 2588964 Query 107217 ACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTG 107274 | | |||| |||||| || ||||||||||||||| || || || || || Sbjct 2588963 --AGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCA 2588906 Query 107275 GATGCCGATGGCCACACGCATAAACATGT 107303 ||| || | || ||||||||| | ||||| Sbjct 2588905 GATACCAACGGACACACGCATGATCATGT 2588877 >seq118 Length=2030615 Score = 122 bits (134), Expect = 1e-22 Identities = 332/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || ||||| ||||||||||| Sbjct 1883140 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 1883199 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | || || | | | | || |||| |||| Sbjct 1883200 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACCAGGA 1883254 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||||||||||| ||| ||||||||||| |||| ||| Sbjct 1883255 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1883314 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| || || || || || |||| | | ||||| || || || | | ||| Sbjct 1883315 CACAGGGAAGGGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 1883374 Query 117221 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | ||||| | | | ||| | | || | || | || ||| || ||||| Sbjct 1883375 CTTGGATCATCTGCTTGCTGGCACGGCCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAA 1883431 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| |||||||| || || || || || || || |||||| || || |||| Sbjct 1883432 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 1883491 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| |||||| ||| | || |||||||||||||| Sbjct 1883492 TGAGACCACGCTTCTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAAGATACCCT 1883551 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456 | ||| || || |||| || |||| ||| |||||| ||| | || | | | |||| Sbjct 1883552 CAACAGCAGCGAAAGCAACCAGACGCTGGGCAAAGGAG-GAGTCCTTATCTTGGATCCAT 1883610 Query 117457 TTCATTGCCCATTTCGCCTTCTT 117479 || ||||| | |||||||| Sbjct 1883611 CGGATGGCCCAGTCAGCCTTCTT 1883633 >seq85 Length=4752789 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 1092323 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 1092382 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| | ||||| ||| | |||||||| || || Sbjct 1092383 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 1092442 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| | || || ||||| || |||||||| || |||||| Sbjct 1092443 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 1092495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978926810960