Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq85 84.2 2e-11 >seq85 Length=4752789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29766 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 29825 ||| ||| || ||||| | ||| | ||||| || || | || |||||||| ||||| Sbjct 1193290 GGGGAAGTTTCGTGGCTCACGCTCTAATTGAGTGTTGAGGGCATCAACGTGATCGAGGTA 1193349 Query 29826 GACGTGAGCGTCTCCCAGGGTGTGGACAA-ACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884 || ||||| || |||| | || || ||| ||| || ||||| | || || | Sbjct 1193350 CACATGAGCATCACCCATGACATGAGTAAGACT-TCCAGGAACTAGCTCACAAACATGGG 1193408 Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944 | | ||||| || | || | ||||||||||||||| ||||| || || | ||||| | Sbjct 1193409 CAAGCATGTGGGTCAACAGCGCGTAGCTGGCGATGTTGAAGGGAACTCCCAAACCCATAT 1193468 Query 29945 CCCCCGACCTCTGGTAGAGCTGACA 29969 | | ||||| || || |||||||| Sbjct 1193469 CGCAAGACCTTTGATATAGCTGACA 1193493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616335073142