Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq143 93.3 3e-14 >seq143 Length=3159380 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || ||||| ||||||||||| ||| | || |||| || | ||| Sbjct 2350486 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 2350427 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| |||||||| |||| || || || || | ||| | |||||||||||| |||||| Sbjct 2350426 CTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 2350367 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | || || || | ||| ||||| | || || || || || || Sbjct 2350366 GGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 2350307 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || |||||||| Sbjct 2350306 CAGGGTCTTGACGAAGATCTGCAT 2350283 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || || || ||||| ||||| || || ||| ||||| Sbjct 2351010 AGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGA 2350951 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| || ||||||||||| |||| |||| |||||| Sbjct 2350950 CCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGAGGAATACCCTCC 2350891 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | | || || | ||| || |||| || Sbjct 2350890 TTGTCCTGGATCTTGCTCTTCACATTATCAATGGTGTCGGATGACTCGACTTCCAGAGTG 2350831 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || || || || ||||| Sbjct 2350830 ATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936420760042