Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq143 102 5e-16 >seq143 Length=3159380 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || || || || || | ||||| Sbjct 2351014 ACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGT 2350955 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||| ||||||||||| |||||||| || || || ||||| || |||||||| || Sbjct 2350954 TCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGAGGAATACC 2350895 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| || ||||| || ||| ||||| || || | || | | ||| | Sbjct 2350894 CTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTGTCGGATGACTCGA-CTTCCA 2350836 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || || || ||||| ||||| ||||| Sbjct 2350835 GAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTG 2350796 Score = 98.7 bits (108), Expect = 6e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || |||||||| ||| ||| || | || || || || || || Sbjct 2350786 ACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGT 2350727 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || | ||||| |||||||| ||||||||||| ||||| || || ||||| || || || Sbjct 2350726 TCGGCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGGATACC 2350667 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| || ||||| || ||| || || ||||||| | | | |||| Sbjct 2350666 CTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCAGACGACTCGA-CCTCAA 2350608 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 | || || || || || ||||| ||||| |||| Sbjct 2350607 GAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 2350575 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || || ||||| ||||||||||| || || || || || ||||||| ||||| Sbjct 2350503 CGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG 2350444 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | || ||||| ||||| || |||||||| | ||||| || || || || || || Sbjct 2350443 CGGCCGTCCTCAAGCTGCTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCC 2350384 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 |||||||| |||||||| ||||| || ||||| || | | | || || || Sbjct 2350383 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAA-CCTCGAG 2350325 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || ||||| || ||||| ||||| || || Sbjct 2350324 GGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTG 2350286 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | ||||| ||||| || |||||||| || |||||||| || || || ||||| Sbjct 2351176 ATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTT 2351117 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAAGGGTAA 480735 || |||||||| || || || ||||| ||| | | | || | ||||||| | Sbjct 2351116 ATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCT-CAAGGGTGA 2351058 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || ||||||||||| |||||||| || Sbjct 2351057 TGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTG 2351024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268168304707592