Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq143 123 3e-23 >seq143 Length=3159380 Score = 123 bits (136), Expect = 3e-23 Identities = 342/516 (66%), Gaps = 15/516 (3%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || ||||| || ||||| || || ||||||||||| ||||| || Sbjct 814352 ACAGCGATAGGGCCGACACCAGGGCCACCACCGCCGTGGGGAATACAGAAGGTCTTGTGG 814411 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 814412 AGGTTAAGATGGCAGACATCAGCACCAATGTCACCAGGGCTGCAGAGACCAATCTGAGCG 814471 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 814472 TTCATGTTGGCACCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 814531 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | ||||| ||||| ||| || ||||| |||| ||| ||| | Sbjct 814532 TGCTTGATCTCAGGCTCAAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 814591 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 814592 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 814648 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||||||| | ||| ||||| || |||||| | ||| |||||| Sbjct 814649 GTCTTGCCGTCACACTTGACAGTAATAACCTTCATACCAGCCATGGCAGCAGAAGCAGGG 814708 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCC 138595 || || || || || || | || || || || || |||| ||||| | || || || Sbjct 814709 TTGGTACCGTGGGCAGAAACAGGGATAAGGCAGACCTTTCGCTTATCCCCATCACGAGCC 814768 Query 138596 TTGATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 | | || || || | ||| || | || || ||| |||||||||| | || | ||| Sbjct 814769 TCG-TGGTAAGCCTTGATACAGCGA--AGACCAGCAAACTCACCCTGAGCACCAGAGTTG 814825 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCA 138689 || || | | ||| || | ||| ||||| ||| Sbjct 814826 GGCTGAAGAGTGGTAGCGTCCATACCGGTGATCTCA 814861 Score = 100 bits (110), Expect = 3e-16 Identities = 168/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||| || || | || ||||| |||||||||| || || || || || || |||||||| Sbjct 815503 ACCGTGGTAGACAGCGTAGAAAGCAGACATATTGGCAAGAAGAGCCTGAGCAGTGCAGAT 815562 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 || || || || || || | | |||||||||||| | ||| || || || | | Sbjct 815563 ATTGCTAGTAGCCTTCTCACGACGAATATGCTGCTCACGAGTCTGGAGAGCCAGGCGAAG 815622 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450 ||||| || || | ||| || ||| || | | |||||| ||||| | ||| Sbjct 815623 AGCAGGCTTACCGAGACGATCCTTGGAAACACCAACGAGACGGCCAGGAATCTTGCGCTT 815682 Query 139451 ATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 || || || | ||| || ||||| ||||| || ||||| ||||| |||| ||||| ||| Sbjct 815683 GTATTTCTCAGATGTAGCGAAGAAAGCAGCGTGGGGACCACCGTAGCCCAGAGGAACACC 815742 Query 139511 AAA 139513 || Sbjct 815743 GAA 815745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996561680080