Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq143 95.1 2e-14 >seq143 Length=3159380 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || || || | ||||| || || || || || || Sbjct 2351022 ATACCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCG 2350963 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | ||| || ||||||||||| | || |||||| || || Sbjct 2350962 GAAAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGA 2350903 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || | || |||||| || | || || || || Sbjct 2350902 GGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTGTCGGATGACTCG 2350843 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| ||||| || ||||| | || || | || || ||||| Sbjct 2350842 ACTTCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984476796132900