Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq125 123 3e-22 seq101 109 7e-18 seq118 100 3e-15 >seq125 Length=3560416 Score = 123 bits (136), Expect = 3e-22 Identities = 94/111 (85%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 ||||||||||||||||||||||||| || || | || || ||| |||| |||||||||| Sbjct 1898146 CCAACTACCTCGACATCAAGCCTCTTCTTGACGTCGGTTGTAAGACTGTTGCCAACATGA 1898087 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||| ||||| ||||||||||| || || ||||| | | ||| Sbjct 1898086 TCAAGGGCAAGTCTCCCGAAGAGATCCGCAAAACTTTCAACATTACGAACG 1898036 >seq101 Length=4191135 Score = 109 bits (120), Expect = 7e-18 Identities = 317/488 (65%), Gaps = 19/488 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| || || || |||| ||| ||||| || ||||| || || | ||||| || Sbjct 2589235 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGA 2589176 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || || | ||| | ||| | || || | |||| | | || Sbjct 2589175 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 2589116 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || ||| ||||||||| | || || ||||| || |||||||| ||||| Sbjct 2589115 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 2589056 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| ||||||| || || | ||||| || || || || || | || || Sbjct 2589055 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAACTGGGGCTGAGGGGTACC 2588996 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||| |||||||||||||| | || ||||| |||| | ||||| || ||| || Sbjct 2588995 GGCATTGAAGAGCGTGGGGGAAGCATGTGTGAAGAACTTGCTTGACATCAGGTTGTATGT 2588936 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | | || ||| | | |||| |||| || || | || || Sbjct 2588935 CTCCAAGACTCGCTCGATATCATC--------------ACCC-CAGATACCAACGGACAC 2588891 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| ||| || |||||||| | ||| | |||| ||||| || Sbjct 2588890 ACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGA 2588831 Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTA--GGAAAAGGCAAAATCGCGGTCGTGGCGGATG 1630542 || || ||| ||| ||||||||| || | || ||||||||||| | | ||| Sbjct 2588830 TCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGG--AAATCGCGGTCATAGACAATG 2588773 Query 1630543 GCGGCGTC 1630550 |||| ||| Sbjct 2588772 GCGGAGTC 2588765 >seq118 Length=2030615 Score = 100 bits (110), Expect = 3e-15 Identities = 198/287 (69%), Gaps = 7/287 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | ||||| |||| || || |||||||| || ||||| Sbjct 1883445 ACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTT 1883504 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| || || | ||| || ||| ||||| ||||| || || || || Sbjct 1883505 CTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCGAA 1883564 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357 | | || |||| |||||||| | ||| || | |||| |||||| || |||| Sbjct 1883565 AGCAACCAGACGCTGGGCAAAGGAG--GAGTCCTTATCTTG--GATCCATCGGATGGCCC 1883620 Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTT 869416 |||| ||||| || | | | || | || || |||||| ||||||| || | Sbjct 1883621 AGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGGTACGTTC-GC 1883679 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| || ||||||| ||||||||||| ||||| || |||||||| Sbjct 1883680 TGGGCAGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTC 1883726 Score = 98.7 bits (108), Expect = 1e-14 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||| | || ||| |||||| |||||||||||||| | || ||||| Sbjct 1883131 GCCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 1883190 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 ||||| | ||| ||||||| | ||||||| ||| ||| || |||||| Sbjct 1883191 TTTTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGA-- 1883248 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || || || || ||||| ||||| |||||||| ||||||| | | ||||||||||| Sbjct 1883249 CCAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGA 1883308 Query 868869 TGAGCGC 868875 ||| || Sbjct 1883309 GGAGGGC 1883315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107118355570518