Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq85 147 2e-29 >seq85 Length=4752789 Score = 147 bits (162), Expect = 2e-29 Identities = 697/1100 (63%), Gaps = 13/1100 (1%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || ||| |||| | || || | Sbjct 2537341 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCAACGGCGGAGACGTTCAT 2537400 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || || || ||||| || || || || | | ||||| Sbjct 2537401 GATACCGTTGGCATCAAGATCGAAGGTAACCTCAATCTGGGGAACACCACGGGGGGCAGG 2537460 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| | || || || || ||| || || || Sbjct 2537461 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTGGTGCGTTGACGCTC 2537520 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| | | |||||| ||| ||| || || || || | || | || || Sbjct 2537521 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAAACCTC 2537580 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || || || || ||||| | |||| |||||||| ||||||||||| Sbjct 2537581 GGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 2537640 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| ||||| | |||||| | || | || | || | | || Sbjct 2537641 GGTCTCGATACCGAGAGAGAGAGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 2537700 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | |||| ||||| || || || | || ||||| || |||||||| || Sbjct 2537701 GCTGGAGGTGTCACCAGAGAGAATCGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 2537760 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 ||| || || | | | || | | || || ||||| | | | | || | ||| Sbjct 2537761 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCT-TCT 2537819 Query 281857 -TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 || || ||||| | ||||| || || | ||||| || || || | || || | Sbjct 2537820 GGACACGGGGGATACGGGTAGATCCACCGACGAGGACAATCTCGTGGACGAGGGACTTGT 2537879 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 | | || | || | || || ||||| | | | | || || | || Sbjct 2537880 CGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGATAGTGGATCGGAAAAGATCCT 2537939 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 282035 ||||| || ||||| ||| | || | || | | | ||||| || ||||| | Sbjct 2537940 GGCAAAGCTCCTCGAAACGAGCACGGGTGATAGAGGTGTAGAAGTCAATACCCTCGAAGA 2537999 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095 ||| || | || |||| || |||| || ||||| |||| || || ||||| || | Sbjct 2538000 GAGAGTCGATCTCGATCGAGGTCTGAGCAGAGGAAGAAAGTGTTCGCTTGGCACGCTCGC 2538059 Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA--TTGAT--TCAAATCTGTTTTATAT 282151 | || || | || | ||| | ||| || || ||| | ||| || |||| | Sbjct 2538060 AAGCAGTTCGGAGACGTCGCAGGGC----GCGGACGTTGGTGCTCAGGTCCTTTTTGTGC 2538115 Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211 ||||||||||| || | || | | || ||||| || || || || ||||| ||| Sbjct 2538116 TTTCTCTTGAATTCGTTTACGAAGTGGTTGACCAGACGGTTGTCGAAGTCCTCACCACCC 2538175 Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271 || | ||| | || | || | | || | ||| | || || |||| | | ||| Sbjct 2538176 AAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCAATGGTAAGGAGA 2538235 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | ||||| || |||||||| | ||| || || || || || || || Sbjct 2538236 GACACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTGCGCTCGCCCTCAACC 2538295 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || |||||||| || |||| || |||||||| || || || ||||||| | ||| Sbjct 2538296 TTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCGTTGATAATTCGGAGAACG 2538355 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||| || || || ||||| || |||||||| | || |||||||| || || Sbjct 2538356 TTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGCTGAGAATCGTTGAAGTAG 2538415 Query 282452 GCAGGAACAGTAATAACGGC 282471 ||||| ||||||| |||||| Sbjct 2538416 GCAGGGACAGTAACAACGGC 2538435 Score = 107 bits (118), Expect = 1e-17 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || | || ||||||||||| ||||||||||| | || |||||| Sbjct 2680517 GGTAAGGAGGGTCGTCTTCGTGGTAATTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 2680458 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | ||| || |||| | ||||||||||| |||| || |||| Sbjct 2680457 ACTGTCATTACTGGTGATGCCAATCTTTCTCTACACGAAGTTGGTGTCCCTCGCAGTATT 2680398 Query 432408 GC 432409 || Sbjct 2680397 GC 2680396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740617929673404