Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq143 141 2e-28 >seq143 Length=3159380 Score = 141 bits (156), Expect = 2e-28 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| ||||||||||| ||||| || || || || | Sbjct 2351021 TACCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGG 2350962 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||| ||| || || ||||| || ||||||||||| |||| ||||| || |||| Sbjct 2350961 AAAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGAG 2350902 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||| || || ||| ||||| || ||||| ||||| || || | || Sbjct 2350901 GAATACCCTCCTTGTCCTGGATC-TTGCTCTTCACATTATCAATGGTGTCGGATGACTCG 2350843 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| ||| || ||||| || || | ||||| || || || ||||| Sbjct 2350842 ACTTCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824004766106