Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq118 168 1e-35 seq101 109 8e-18 >seq118 Length=2030615 Score = 168 bits (186), Expect = 1e-35 Identities = 352/511 (69%), Gaps = 20/511 (4%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||| ||||| ||||| || |||||| | |||| Sbjct 1883982 GATTTGGCAAATGTAC-AAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACC 1883924 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| ||| | ||| |||| ||| Sbjct 1883923 TGTCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTC 1883868 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || ||| | || || ||| ||||| ||| ||||| || || ||||||||| | Sbjct 1883867 GTCTCTCACATTCTTGC-TTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGT 1883809 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | |||||||| | || ||||| |||| || ||||| |||||||| Sbjct 1883808 CGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGAT 1883749 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||| ||||| || |||||||| ||||| |||||||||||| ||||||| Sbjct 1883748 CATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGA 1883689 Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 || | | || | || ||||||| |||||| || || | || | | | || | Sbjct 1883688 GCCTGCCCAG-CGAACGTACCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGA 1883630 Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTTGCCGAGCGGC 1456185 |||| |||||||| || |||||| |||| | || ||| | ||||||| |||| | Sbjct 1883629 AGGCTGACTGGGCCATCCGATGGATC--CAAGATAAGGACTCCTC-CTTTGCCCAGCGTC 1883573 Query 1456186 TCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244 | || | || || || || ||||| ||||| ||| || ||| | || || | Sbjct 1883572 TGGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCTTCTATTTTCT 1883513 Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||||||| || |||||||| ||||| Sbjct 1883512 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCT 1883482 >seq101 Length=4191135 Score = 109 bits (120), Expect = 8e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||||||||| |||||||| || || | || ||| || || ||||| || | || Sbjct 2588978 CCCACGCTCTTCAATGCCGGTACCCCTCAGCCCCAGTTGTCATCTTGCTTCTTGGTTGAT 2589037 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| ||||| || || |||||| || || | |||||| Sbjct 2589038 ATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCC 2589097 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| ||| || || || ||| | | ||| | || || | ||| | ||| | Sbjct 2589098 AAGATGGCTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGGCTCATACATC 2589157 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| || ||||| |||| || |||||||| || || ||| |||| Sbjct 2589158 GCCGGTACCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACT 2589217 Query 260165 GCGCGCTACGTCGACCAG 260182 || || || ||||||||| Sbjct 2589218 GCTCGGTATGTCGACCAG 2589235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177786701233148