Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq225 107 2e-18 seq143 104 2e-17 >seq225 Length=1293757 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || || |||||||| || ||||| Sbjct 459240 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 459181 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||||||| |||||| ||| | || Sbjct 459180 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 459122 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | |||||||| || ||||| | || || | Sbjct 459121 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 459062 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 459061 CGAAAATCTGCAT 459049 >seq143 Length=3159380 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||| ||||| ||||||||||| |||| Sbjct 2351019 CCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 2350960 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || || ||||| || ||||| || | ||||| ||||||| |||| Sbjct 2350959 AGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGAGGA 2350900 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||||| | | | | |||||| || || || Sbjct 2350899 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTGTCGGATGACTCGACT 2350840 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || || | || || || || || ||||| Sbjct 2350839 TCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | || || |||| || |||||||| || ||||| Sbjct 2350474 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 2350415 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || |||||||| | || | || |||||||||| ||||| ||| | || Sbjct 2350414 AATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 2350356 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||||| || || || |||| || || | Sbjct 2350355 TGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGA 2350296 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 2350295 CGAAGATCTGCAT 2350283 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||||| | |||||| |||| ||||| ||||| || ||||| Sbjct 2350755 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCCAGTTGCTTGCCAGCAAAA 2350696 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | || | | |||||||||| |||||| ||| | | | Sbjct 2350695 ATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATTG 2350636 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || ||| || ||||| | ||||| || || || || | || || || Sbjct 2350635 TCGATGGTATCAGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACG 2350576 Query 35726 AATAT 35730 | ||| Sbjct 2350575 ACTAT 2350571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792168730320