Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq85 174 5e-38 seq143 145 2e-29 seq225 105 2e-17 >seq85 Length=4752789 Score = 174 bits (192), Expect = 5e-38 Identities = 560/858 (65%), Gaps = 11/858 (1%) Strand=Plus/Minus Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || || || || || || |||||| |||| || || |||| ||| | || ||||| Sbjct 2538780 GATATCATCGCCAACGACCAGGGTAACCGAACTACCCCCTCATTCGTCGGTTTCACCGAC 2538721 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| ||||||||||| | || || || |||| ||| || || | || || Sbjct 2538720 ACCGAGCGTCTGATTGGTGATGCCGCCAAGAACCAAGTCGCTATGAACCCTCAGAACACT 2538661 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 || || || || |||||| | || ||| | | || | ||| || | ||| Sbjct 2538660 GTCTTCGACGCCAAGCGATTGATCGGTCGCAAGTTCGCCGACGCTGAGGTTCAGGCCGAT 2538601 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501 | || || || || || | | || | | ||| |||| || || | || ||||| Sbjct 2538600 ATGAAGCACTTCCCCTTCAAGATCGT-CGACAAG--GGTGGCAAGCCCAACATCGAGGTC 2538544 Query 349502 GAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGT 349560 || | || || || || || || || ||||| || || || | ||| | | Sbjct 2538543 GAGTTCAAGGGCGAGACCAAGACC-TTCACCCCCGAGGAGATCTCTGCTATGATCCTCAC 2538485 Query 349561 TAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTAC 349620 || ||| || | ||||| | || | || || || || | | || ||| |||| Sbjct 2538484 CAAGATGCGTGAGACCGCTGAGTCCTACCTCGGCGAGACTGTCAACAACGCCGTTGTTAC 2538425 Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 ||| || ||||| || || ||| | |||||| || || || |||||||| ||| || Sbjct 2538424 TGTCCCTGCCTACTTCAACGATTCTCAGCGTCAAGCCACCAAGGATGCTGGTCTCATCGC 2538365 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || | || ||||| |||| || || || || |||||||| || ||||| || || || Sbjct 2538364 CGGTCTCAACGTTCTCCGAATTATCAACGAGCCTACTGCTGCCGCCATTGCCTACGGTCT 2538305 Query 349741 TGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 ||| || | | ||| || || | || || || ||| | |||||||||||||| Sbjct 2538304 TGACAAGAAGGTTGAGGGCGAGCGCAACGTCCTGATCTTCGATCTTGGTGGTGGTACTTT 2538245 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 ||||| || || || || |||| ||||| || || || || || | || || ||||| Sbjct 2538244 CGATGTGTCTCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCCGGTGA 2538185 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATT 349920 || || | ||||| || || || || || ||||| || || || || || ||||| Sbjct 2538184 CACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTAAACGAATT 2538125 Query 349921 TAAGCGTCAAGC-TAAAATTGATATTGGAG-ATAATCCT-AGAGCAATGCGTCGCCTAAG 349977 ||| | |||| |||| || | ||| | | | | | || |||| || || | Sbjct 2538124 CAAGAG-AAAGCACAAAAAGGACCT--GAGCACCAACGTCCGCGCCCTGCGACGTCTCCG 2538068 Query 349978 AACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAAT 350037 |||||| || || ||||| ||||| | | || || || | || ||||| || || || Sbjct 2538067 AACTGCTTGCGAGCGTGCCAAGCGAACACTTTCTTCCTCTGCTCAGACCTCGATCGAGAT 2538008 Query 350038 TGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGA 350097 || ||||| || || | || |||| | ||||| || |||||||| || || || Sbjct 2538007 CGACTCTCTCTTCGAGGGTATTGACTTCTACACCTCTATCACCCGTGCTCGTTTCGAGGA 2537948 Query 350098 ATTATGTATGGATCTTTT 350115 | || ||||||||| Sbjct 2537947 GCTTTGCCAGGATCTTTT 2537930 Score = 116 bits (128), Expect = 1e-20 Identities = 192/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 378201 ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGC 378260 |||||| | || |||| | |||||| ||||||||| |||| ||| || ||||| Sbjct 2678967 ATCTTCCAGAGCCTTAACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACTGC 2679026 Query 378261 AGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAG 378320 ||||||||| | ||| | |||||| |||| || |||||||| || || | ||||| || Sbjct 2679027 AGTATCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGCTGGGAGTGAG 2679086 Query 378321 TCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGT 378380 |||| | | || |||| | ||| || | || | || || | ||| | || || Sbjct 2679087 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCCTCGGGTGAGTAATCGTCCTTGGT 2679146 Query 378381 ATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTG 378440 | ||||||||||| |||| || || ||| | ||||| || || || || ||| | || Sbjct 2679147 GAAGTGAGGTAATGTGCGATACTTGAAACCAAAAGGAATACGCTTGCCTTCGACAATTTG 2679206 Query 378441 TTGAC---CAAGTGCAGAAACCATTTGAGCAATATT 378473 || | |||| |||| |||||||| |||||| Sbjct 2679207 CTGTCCGACAAGCGCAG---TCATTTGAGAAATATT 2679239 Score = 113 bits (124), Expect = 1e-19 Identities = 105/133 (79%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 |||||||||||| | ||||| ||| || || | |||||||| || ||||| || || Sbjct 2678206 CGTGGCACACCAAGAGTAACGTTC---TTGGACGACACACCAGCGAAATGGAAGGTGTTC 2678262 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||||| ||||||||||| |||||||| || | ||| ||||||||||| Sbjct 2678263 AGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGAACACCAACCATTTCA 2678322 Query 377578 CCAGGATTGACAA 377590 ||||| ||||||| Sbjct 2678323 CCAGGGTTGACAA 2678335 >seq143 Length=3159380 Score = 145 bits (160), Expect = 2e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || |||||||| || || ||||| || || || Sbjct 2351023 CATACCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTC 2350964 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| ||||| |||||||| || ||||||||||| || || || || || || Sbjct 2350963 GGAAAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGG 2350904 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTT 140685 |||||| || || || ||||| || || ||| || ||||||||||| | || |||| | Sbjct 2350903 AGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCACATTATCAATGGTGTCGGATGACT 2350845 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || | |||||||| || || || || || || || ||||| Sbjct 2350844 CGACTTCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | ||||||||||||||||| ||||| || ||||| || | Sbjct 2350517 TTTGCATACCACCGCGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGT 2350458 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || || || || ||||| || || || ||||| || | |||||||| | Sbjct 2350457 AATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAAATCAAGCGTTGCTGGT 2350398 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || || |||||||| || | || || || || || | || || | Sbjct 2350397 CGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAG 2350338 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || | ||||| ||||| || || || || || |||||||| Sbjct 2350337 ACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2350283 Score = 134 bits (148), Expect = 4e-26 Identities = 176/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 140498 AATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAAT 140557 |||| |||| |||||||| | || ||||| || || ||||| ||||| || || || Sbjct 2351260 AATAGCTTACTGGCCACCACGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGAT 2351201 Query 140558 ATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTG 140617 || || || || || || |||||||| | || || ||||| ||||| ||||| || Sbjct 2351200 GTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTG 2351141 Query 140618 CTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAAT 140676 ||||||||| || || || || ||||||||||| || ||| || || || || || | | Sbjct 2351140 CTGATCAGGGGGGATACCCTCCTTATCCTGAATCTT-GCTCTTCACGTTGTCGATAGTGT 2351082 Query 140677 CAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736 || | ||||| ||||| || | |||||||| || || || || || |||||||||| Sbjct 2351081 CACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCA 2351022 Query 140737 T 140737 | Sbjct 2351021 T 2351021 Score = 127 bits (140), Expect = 6e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || |||||||| ||||| || || || || || | Sbjct 2350799 TTTGCATACCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGT 2350740 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | | ||||| || ||||| ||||| || |||||||| || ||||| ||||| | Sbjct 2350739 AGTCGGCAAGGGTTCGGCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGT 2350680 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || || || || ||||| || || | || ||||| || || | |||||| | Sbjct 2350679 CAGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCAGACG 2350620 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || ||||| || | ||||| || || || || || || Sbjct 2350619 ACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 2350577 >seq225 Length=1293757 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 459279 CATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 459220 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || ||||| || || || || ||||||||||| || || ||||| ||||| Sbjct 459219 GCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCAGG 459160 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || || || | || || | || Sbjct 459159 GGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTC 459100 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| || || || || || || ||||||||||| Sbjct 459099 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 459049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249468793962